Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1872 ATGATGATGACCAACTTTCTCAACTTCACTAAAAAAAAACTCAGATTCTTGGTCCTCTTTCTAGCCTTCAATGCCCACCCTTTCTTCATTCAACTCTCTTATTTCTGGATACTTTCTCTGCTTGGTTACCTTGCTCTCAAGCTCTCAAACCCAAGAACCACCCTTAAACCAAAGGACTTTGACCTCTTTTACACCTCTGTTTCTGCTTCCACTGTTTCCAGCATGGTGGCTGTTGAAATGGAGGTTTTCTCCAATTCTCAACTCCTTCTCCTCACCCTTCTCATGTTTCTTGGCGGGGAAGTTTTCACTTCCATGCTTGACCTTCTATTTGCCAGGTACAAATTCACTCAGAGTGTTCCAAACAGAGTTAGGAGCACTCCTTTTTCATCCACAGAGAAGCCTCAAATTCATGCCAAACATGTTGAGCTTGGTTTAATCTCTATTATTCCTCACTCAGAATCTGAAAACCACAACCTTAACCTTCCAAAGGGCACCATGGTTCCCTTTAAGGACAGTGAAAGACTTAAGTATAACTGTCTAACTTATCTGATTTTTGTAGTCTTAGGTTACCTTGTTGTGGTTCAACTTGTTGGCTTCAGTTTGGTGTCTTTGTACATGAGCTTGGTACCAAGTGCAACACAAGTACTGAAAAACAAAGACATTAAGGTTGCAACATTTTCTTTGTTTACCATAGTTTCCACTTTTGCAAGTTGTGGTTTTGTCCCCACCAACGAGAACATGATGGTTTTCAAGAAGAATTCGGGGCTTCTCCTCCTCGTACTCCCACACATACTTCTAGGTAACACCCTTTATCCACCATGTTTGAGGCTTGTGATAATGGGTCTGAGAAAGGTTAGCAGAAGAGAAGAATTCTCGTACCTGCTGAAGAATTTCAAAGACGTGGGGTATGATCATATGCTCTCTGCTGTTCACTGCTGGCTCCTTGTTGCTACTGTTTTGTGTTTGAATGTGATACAGTTTGTGATGTTTTGGGCGATGGAGTGGAAGAACAAAAGCATGGAGGGTTTGAATGTTTATGAGAAAGTGGTGGGGTCGTTGTTCCAAGTTACGAATGCGAGACACAGTGGTGAATCTGTCTTCGATCTCTCTTCACTCTCTTCAGCCATGTTGGTGCTCTTCATTCTCATGATGTACCTTCCACCATACACTACATTTTTACCTGTAAGAGAAGAGGAAAATGATGTGAAGAGAAACAGAAAAAGCCCAGTGGAGTGTGTTGTATTATCCCAACTCTCTTACTTGGCCATATTCATTATTCTGGTCTGCATCACTGAGAGAAAAAGCTTGAAAGAGGATCCCCTCAACTTCAATGTCCTCAACATCACTCTAGAAGTCATCAGTGCTTATGGGAACGTGGGGTTCTCAATGGGATACAGCTGCGAAAGACAGTTGAAAGACGATGGTATGTGCAAAGATTCATGGGTTGGATTTTCAGGTAGATGGAGCAATGGTGGAAAGTTCATCCTTATCTTGGTCATGTTCTTTGGGAGGCTCAAGAAATTCAACATGAAAGGTGGCAAAGCATGGCACCTCTCCTAA 1560 0.4218 MMMTNFLNFTKKKLRFLVLFLAFNAHPFFIQLSYFWILSLLGYLALKLSNPRTTLKPKDFDLFYTSVSASTVSSMVAVEMEVFSNSQLLLLTLLMFLGGEVFTSMLDLLFARYKFTQSVPNRVRSTPFSSTEKPQIHAKHVELGLISIIPHSESENHNLNLPKGTMVPFKDSERLKYNCLTYLIFVVLGYLVVVQLVGFSLVSLYMSLVPSATQVLKNKDIKVATFSLFTIVSTFASCGFVPTNENMMVFKKNSGLLLLVLPHILLGNTLYPPCLRLVIMGLRKVSRREEFSYLLKNFKDVGYDHMLSAVHCWLLVATVLCLNVIQFVMFWAMEWKNKSMEGLNVYEKVVGSLFQVTNARHSGESVFDLSSLSSAMLVLFILMMYLPPYTTFLPVREEENDVKRNRKSPVECVVLSQLSYLAIFIILVCITERKSLKEDPLNFNVLNITLEVISAYGNVGFSMGYSCERQLKDDGMCKDSWVGFSGRWSNGGKFILILVMFFGRLKKFNMKGGKAWHLS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1872 519 Pfam Cation transport protein 410 471 IPR003445 GO:0006812|GO:0008324|GO:0055085
Pvu4g1872 519 Pfam Cation transport protein 175 386 IPR003445 GO:0006812|GO:0008324|GO:0055085
Pvu4g1872 519 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 17 519 - -
Pvu4g1872 519 PANTHER SODIUM TRANSPORTER HKT1 17 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1872 Pvu-Chr4 45721561 45724948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1872 47 518 Inorganic Solute Cotransporters AT4G10310 51.340 5.56e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1872 K24976 - gmx:100797835 771.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1872 4 45721561 45724948 Pvu4g1872 4 45721561 45724948 ECH