Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1857 ATGACAATACCATTTTACTACTATTTAACCATCTTCTTATTCCTCAGCTGTGTGCACTCTCAGACTCAGCTGCAAGATCAAGAACATGCAGTTCTTCTGCGTATAAAGCAGCACCTACAAAACCCTTCATTTCTCACTCACTGGACCCCTTCAAACACTTCCCACTGCTCTTGGCCAGAGATAACATGCACCAGTGACTCTGTCACTGGTTTAACTCTGTTCAACAGTGGAATCCATCAAACACTACCCAATTTCCTGTGTGACCTCAAAAACCTCACACATGTTAATTTCAGCACAAACTCCATTCCGGGGGAGTTCCCAACTTTTCTCTATAAATGTTCCAAGCTGGTGTCCCTTGACCTTGAAGGGAATGAGTTCACTGGTAGCATTCCTAATGACATAGACAAGTTGGTTAACTTGCAGCATCTTAATCTTGGTTCCACCAACCTCTATGGTGATATTCCCACAAGCATTGGAAGGTTAAAGCATTTGAGAGTTCTTCAACTTCACTATTGTCTATTTAATGGCACTTTTCCTGCTGAGAGTATTGCCAACTTGCTCAATCTTGAGTTCTTGGACATGTCCTCTAACTTGGTGCTCCCTCCTTCCAAGTTCCCATCAGGGCTCACCCAGTTGAAAAAAGTGAAGTTCTTTCACATGTACAGTTGCAATCTCTTCGGGGAAATCCCTGAAACCATAGGAGAAATGGTGGCTTTGGAGAACTTGGATTTGTCACGAAGCAATTTCAGTGGAGAAATTCCCAAAGGCTTGTTCATGCTCAGGAATTTGAGCATACTCTACCTTTTCAATAACAGCCTCTCTGGGGAGATACCTGGTGAGATTGAAGCATTGAATTTAACTGATCTCGATCTTGCACAGAACAATCTTGCAGGGAAAATACCTCAAGATTTTGGGAAGCTACAAAAATTAAGATGGTTAAGTTTGTCTCTAAATAACTTGTCAGGGGAGATTCCACAAAGCTTAGGCCGTCTTGCATCTCTAGAACATTTTCATATCATGTTCAATAACTTGTCAGGTATTCTTCCTCCTGATTTTGGTGGCTACTCCGAGCTTAAAACATTTCTGGTTGCAAATAATAGTTTCAGTGGAAAGCTCCCGGAGAATTTATGCTATCATGGTCAGTTACTTAATCTATCTGCTTATTGTAATCATCTGAATGGGGAGTTACCAGAATCACTTGGTCACTGCAGTAGTTTGAAGGATTTAAAAATTTATAGTAATGAGTTTTCTGGTAGCATTCCTAGTGGTCTTTGGACTTTCAATTTGTCAAATTTCATGGTGAGCCATAATAAGTTCAGTGGTGAGCTTCCTGAGAGATTGTCCTCAAGTATTTCAAGATTGGAGATAGATTACAATCAGTTTTATGGTAGGATTCCAACAGGGGTGTCTTCATGGACTAATGTGGTTGTGTTTAAAGCAAGTGAGAACTACCTCAATGGTAGTGTTCCAAAGGAGTTAACAAATCTTCCCAAGCTAACAACTCTTTTGCTTGATCATAACCAGCTCACAGGGCCACTTCCATCAGATATAATATCATGGAAGTCCCTAGAGAATCTAAATTTGAGCCATAACCAACTCTCTGGGAAAATCACAGATGGAATTGGTTATTTACCTGTCCTCAATCAGCTTGACCTGTCAGAAAACCAATTCTCAGGTCAAGTTCCTTCAATACTTCCTAGACTCACTAATCTCAACCTGTCCTCTAATCATTTTACAGGGAGAGTTCCAAATGAGTTTGAAAATTCTGTGTATTCTGAGAGCTTTTTGAATAATTCTGGCCTCTGTGCTGATACCCCAGTACTGAACCTAAGGCTGTGCAATGTTGGCTTTGAAAAGACAACCAAAGGCTCTTCTTGGTCTCTTGCTTTGATTCTGTGTTTGGTGGCAGTAGCCCTTTTGTTGGCTTTGTTGATATCACTCTTGATTATCAAACTTTTCAGAAGAAGAAAACATGGTTTGGATAACTCATGGAAGCTCATTTCCTTTCAAAGGCTGAGTTTCACTGAATCAAACATAGTGTCATCAATGACAGAACACAATGTTATCGGAAGTGGTGGATTTGGCACAGTATACCGTATCCCGGTTGATGGTTTAGACCATATTGCTGTCAAGAAGATCTGCAGTAACAGAAAGTTAGACCGAAAGCTAGAGAGCTCATTTCGTGCAGAAGTGAAAATATTGAGCAACATTCGTCATAAAAACATTGTGAAGTTGTTGTGTTGCATCTCCAATGAGGACTCTATGCTCCTTGTGTATGAGTATTTGGAAAACCGTAGCCTAGATAGGTGGCTGCACAATAAGGGCAAGTCATCAACTGTGTCAGTTTCAATGGATCATTTTGTGCTTGATTGGCCAAAGAGATTGAAAATAGCCATTGGGGTGGCTCATGGTTTGTGCTACATGCACCATGATTGCTTCCCACCGATTGTTCATAGAGATGTGAAAACAAGCAACATCCTTTTGGATGCTCAATTCAATGCAAAAATAGCTGATTTTGGTCTGGCAAGGATGTTAATGAAGCCAGGGGATCTTGCTACCATGTCTTCTGTTGTTGGCTCATTTGGCTATATGGCTCCAGAATATGTTCAAACAACACGAGTTAGTGAGAAGATTGATGTGTTCAGCTTTGGAGTTGTACTACTGGAGTTGACAACTGGTAAAGAAGCTAACTATGGTGATGAGCACTCTTCTCTTGCAGAGTGGTCATGGCGCCACATAATTGTAGGAAGCAAAATAGAAGAGCTGCTAGACAATGATTTCATGGATCCAAGTTACACAAATGAAATGTGCAGTGTTTTCAAACTTGGGGTCTTGTGCACTTCAACACTTCCTGCTAATAGGCCTTCCATGAAAGAGGTGCTACACATATTGGTCACCATAAGAGAAGGTTTTGCTTTTGGAGAGGGGAATGTTAGGCAATGTGATGGTGTTCCCCTTCTTAAGAATTCTAGATGGAAGAGTAGGTTGGATGATGCTAGTGATAATGATAGTGATTAG 3018 0.4079 MTIPFYYYLTIFLFLSCVHSQTQLQDQEHAVLLRIKQHLQNPSFLTHWTPSNTSHCSWPEITCTSDSVTGLTLFNSGIHQTLPNFLCDLKNLTHVNFSTNSIPGEFPTFLYKCSKLVSLDLEGNEFTGSIPNDIDKLVNLQHLNLGSTNLYGDIPTSIGRLKHLRVLQLHYCLFNGTFPAESIANLLNLEFLDMSSNLVLPPSKFPSGLTQLKKVKFFHMYSCNLFGEIPETIGEMVALENLDLSRSNFSGEIPKGLFMLRNLSILYLFNNSLSGEIPGEIEALNLTDLDLAQNNLAGKIPQDFGKLQKLRWLSLSLNNLSGEIPQSLGRLASLEHFHIMFNNLSGILPPDFGGYSELKTFLVANNSFSGKLPENLCYHGQLLNLSAYCNHLNGELPESLGHCSSLKDLKIYSNEFSGSIPSGLWTFNLSNFMVSHNKFSGELPERLSSSISRLEIDYNQFYGRIPTGVSSWTNVVVFKASENYLNGSVPKELTNLPKLTTLLLDHNQLTGPLPSDIISWKSLENLNLSHNQLSGKITDGIGYLPVLNQLDLSENQFSGQVPSILPRLTNLNLSSNHFTGRVPNEFENSVYSESFLNNSGLCADTPVLNLRLCNVGFEKTTKGSSWSLALILCLVAVALLLALLISLLIIKLFRRRKHGLDNSWKLISFQRLSFTESNIVSSMTEHNVIGSGGFGTVYRIPVDGLDHIAVKKICSNRKLDRKLESSFRAEVKILSNIRHKNIVKLLCCISNEDSMLLVYEYLENRSLDRWLHNKGKSSTVSVSMDHFVLDWPKRLKIAIGVAHGLCYMHHDCFPPIVHRDVKTSNILLDAQFNAKIADFGLARMLMKPGDLATMSSVVGSFGYMAPEYVQTTRVSEKIDVFSFGVVLLELTTGKEANYGDEHSSLAEWSWRHIIVGSKIEELLDNDFMDPSYTNEMCSVFKLGVLCTSTLPANRPSMKEVLHILVTIREGFAFGEGNVRQCDGVPLLKNSRWKSRLDDASDNDSD* 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1857 1005 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 7 995 - -
Pvu4g1857 1005 Gene3D Transferase(Phosphotransferase) domain 1 762 974 - -
Pvu4g1857 1005 Pfam Protein kinase domain 685 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1857 1005 Gene3D Ribonuclease Inhibitor 471 607 IPR032675 -
Pvu4g1857 1005 Gene3D Ribonuclease Inhibitor 378 470 IPR032675 -
Pvu4g1857 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Pvu4g1857 1005 Pfam Leucine Rich Repeat 115 137 IPR001611 GO:0005515
Pvu4g1857 1005 Pfam Leucine Rich Repeat 567 588 IPR001611 GO:0005515
Pvu4g1857 1005 ProSiteProfiles Leucine-rich repeat profile. 522 544 IPR001611 GO:0005515
Pvu4g1857 1005 SMART LRR_typ_2 307 331 IPR003591 -
Pvu4g1857 1005 SMART LRR_typ_2 186 212 IPR003591 -
Pvu4g1857 1005 SMART LRR_typ_2 137 161 IPR003591 -
Pvu4g1857 1005 SMART LRR_typ_2 260 284 IPR003591 -
Pvu4g1857 1005 SMART LRR_typ_2 496 520 IPR003591 -
Pvu4g1857 1005 SMART LRR_typ_2 565 588 IPR003591 -
Pvu4g1857 1005 SUPERFAMILY Protein kinase-like (PK-like) 674 964 IPR011009 -
Pvu4g1857 1005 Gene3D Ribonuclease Inhibitor 25 178 IPR032675 -
Pvu4g1857 1005 Gene3D Ribonuclease Inhibitor 179 282 IPR032675 -
Pvu4g1857 1005 Gene3D Ribonuclease Inhibitor 283 377 IPR032675 -
Pvu4g1857 1005 SUPERFAMILY RNI-like 285 587 - -
Pvu4g1857 1005 ProSiteProfiles Protein kinase domain profile. 683 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1857 1005 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Pvu4g1857 1005 SUPERFAMILY L domain-like 28 284 - -
Pvu4g1857 1005 Gene3D Phosphorylase Kinase; domain 1 660 761 - -
Pvu4g1857 1005 SMART serkin_6 683 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1857 1005 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 995 - -
Pvu4g1857 1005 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Pvu4g1857 1005 ProSitePatterns Protein kinases ATP-binding region signature. 689 712 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1857 Pvu-Chr4 45637544 45641336 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1857 22 998 Receptor kinase-like Gene Family AT5G25930 49.039 0.0 894
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu4g1857 Pkinase 1.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1857 - - gmx:100819744 1627.84