Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1856 ATGAAACTATTCACCCCATCATCATCATCATCATATCTTAACTTGCTGTTTCACTCTCTTGCAATCTTGCTCCTGGTTTTTACTCATGCAAACTCTCAGTCTCAATCTCAGTTGCATGATCAAGAACATGCAATCTTACTGAGGATAAAGGAGTATTTTGAGAACCCTCCATTCCTCAGTCACTGGACCTCATCAAACTTCTCTCACTGCTCTTGGCCAGAGATAAAGTGCAGTGATGATGATTCTGTCACTGGATTGACTTTGTCCAACAATAGCATTCATCAAACCATACCCTCTTTCATATGTGACCTCAAAAACCTTACACATGTTGATTTCTACAACAATTATATTCCTGGGGAGTTCCCAACATATCTTGTCAACTGCTCCAAGTTGGAGTACCTAGACCTGTCTCAGAACAACTTTGTTGGTAGCATCCCTCGTGACATTGGCAACTTCTCTAATTTGCAGTATCTTAACCTTGCTTACACCAATTTATCTGGTGACATTCCTTCTAGCATTGGAACTCTAAAGGAACTCAGAAATCTTCAACTTCAAAACTGTCTATTCAACGGAACCATCCCTGCTGAGATTGGCAACTTGACCAATCTTGAAATCTTGGAATTGTCAGGTAACCCCATGCTCCCTCCTTCGAGGTTGCATGATAACTGGACCCGGTTGAGCAAGTTGAAGTTCCTTTTTATGTTTGAGTGCAACTTGGTGGGAGAGATCCCTGACACCATTGGAAACATGGTGGCTTTGGAGAGATTGGATCTATCTGTAAACGATTTGAGTGGTCAAATTCCCAGCGGTTTGTTCATGCTGAAGAGTCTCAACATAATTTTTCTTTCTAGAAACAATCTCTCCGGGGTAATACCTGATGTGGTTGAAGCATTGAATTTGACCATCATTGATCTTACACAAAATTCCATCTCAGGAAAAATCCCAGATGGTTTTGGAAAGCTTCAAAGTTTAACTGGTTTGGCTTTGTCTATAAATAACTTACAAGGGGAGATACCACAAAGCATAGGCCTTCTTCCATCCTTGGTAGATTTCAAAGTATTTTCCAACAAATTATCAGGTACTCTTCCTCCTGATTTTGGCCGCCACTCAATGCTTAAAACCTTTATGATTTCTGATAATGGTTTTAGTGGAAAGCTACCTGAGAATTTATGCTATAATGTTCAGTTGCAAAACATATCTGTCTATGAAAATCATCTTAGTGGGGAGTTGCCAAAATCGCTTGGTGATTGTAGTAGCCTGATAGATCTGAAAATTTATAGTAATGAGTTTTCTGGTAGCATTCCAAGTGGTCTTTGGACTTTCAATTTGTCAAATTTCATGGTGAGCCGTAATAAGTTCAGTGGTGAGCTTCCTGAGAGATTGTCCTCAAGTATTTCAAGATTGGAGATAGATTACAATCAGTTTTATGGTAGGATTCCAAAAGGGGTGTCTTCATGGACTAATGTGGTTGTTTTTAAAGCCAGTAAGAACTACCTTAATGAGAGTATTCCAAGAGATTTAACAGCACTTCCGAAGCTAACAACTCTTTTGCTTGATCAGAACCATTTCACAGGGTCACTCCCATCAGATATAATATCATGGAAGTCCCTTTCAAATCTAAATTTGAGACAAAACCAACTCTCTGGACATATTCCTGATTCAATTGGTCATTTACCTGTTCTCAGCCAACTTGATCTGTCAGAAAATCAATTCTCTGGTCAAATTCCTAATCTTCCCAGACTCACCAATCTCAATCTTTCCTCCAATTCTTTGACAGGGAGGGTGCCAAATGAGTTTGAAAATTCTGCTTTTGAAACCAGCTTTTTGAACAATTCTGGCCTTTGTTCTGATACCTCAGCACTGAATCTCAGGTCGTGTAATTATAGCCCTCCAAGTGAAAGCAAGGACTCATCTTGGTCTGTTGCTTTGATCATAAGTCTGGTGGTAGTGGCCTGTTTCTTGGCTTTGTTGGCATTGTTCTTGATCATCAGATTTTACAGAAAAAGAAAGAGGGGATTGGATAGGTCATGGAAGATCATTTCTTTCCAAAGGCTGAGTTTCACTGAATCAAACATAGTGTTATCACTCACAGACAATAACATCATTGGCAGTGGTGGATATGGTGCAGTATACCGCAGTGCAGTTGATGGTTTAGGCTATGTTGCTGTCAAGAAGATTTGGGAACAGAAAAAGCTAGACAAGAAGCTTGAGAACTCATTTCACACTGAAGTTAAAATATTAGGCAACATTCGTCACAGAAACATTGTGAAGTTGATATGTTGCATCTCTAAAGAGGACACTATGCTCCTTGTTTATGAGTATGTGGAAAACCACAGCCTTGACAGGTGGTTGCACAGGAAGAACAAGTCATCATCAGCTGTTTCAGGTTCAGTGCATCATGCTGTTCTTGATTGGCCAAAGAGATTGCATATAGCAATTGGAACTGCACAAGGTTTGAGCTACATGCACCATGACTGTTCTCCACCTATTGTTCATCGAGATGTGAAAACAAGCAACATTCTTTTGGATGATCAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCCAGGATTTTGATGAAACCAGGGGAACTTGCCACCATGTCAGCTGTGATTGGATCATTTGGCTATATGGCTCCAGAGTATATTCAAACAACTAGAGTCAGTGAGAAGATTGATGTCTTCAGCTTTGGGGTGATCCTATTGGAACTTACAACTGGTAAAGAAGCTAATTATGGTGATGAGCACTCATCTCTTGCAGAGTGGGCGTGGAGGCACCACCAATTAGGAAGCAACATAGAAGAGCTGCTAGACAGAGAAGTCATGGAATCCAGTAACTCAGGTGGAATGTGTAAGGTTTTCAAACTAGGTGTCATGTGCACTGCAACACTTCCTTCTACTAGACCATCCATGAAAGAGGTTCTACAAGTATTGCTTTCTTGTGAAGAATTTTCTAAGGGAGAGATTAATATTGGCCACTGTGATGATGATGTTCCCTTTCTTAGAAATTCAAAAAGTGAGCACAAGTTGGATATTGATAATGATACCTAG 3051 0.4005 MKLFTPSSSSSYLNLLFHSLAILLLVFTHANSQSQSQLHDQEHAILLRIKEYFENPPFLSHWTSSNFSHCSWPEIKCSDDDSVTGLTLSNNSIHQTIPSFICDLKNLTHVDFYNNYIPGEFPTYLVNCSKLEYLDLSQNNFVGSIPRDIGNFSNLQYLNLAYTNLSGDIPSSIGTLKELRNLQLQNCLFNGTIPAEIGNLTNLEILELSGNPMLPPSRLHDNWTRLSKLKFLFMFECNLVGEIPDTIGNMVALERLDLSVNDLSGQIPSGLFMLKSLNIIFLSRNNLSGVIPDVVEALNLTIIDLTQNSISGKIPDGFGKLQSLTGLALSINNLQGEIPQSIGLLPSLVDFKVFSNKLSGTLPPDFGRHSMLKTFMISDNGFSGKLPENLCYNVQLQNISVYENHLSGELPKSLGDCSSLIDLKIYSNEFSGSIPSGLWTFNLSNFMVSRNKFSGELPERLSSSISRLEIDYNQFYGRIPKGVSSWTNVVVFKASKNYLNESIPRDLTALPKLTTLLLDQNHFTGSLPSDIISWKSLSNLNLRQNQLSGHIPDSIGHLPVLSQLDLSENQFSGQIPNLPRLTNLNLSSNSLTGRVPNEFENSAFETSFLNNSGLCSDTSALNLRSCNYSPPSESKDSSWSVALIISLVVVACFLALLALFLIIRFYRKRKRGLDRSWKIISFQRLSFTESNIVLSLTDNNIIGSGGYGAVYRSAVDGLGYVAVKKIWEQKKLDKKLENSFHTEVKILGNIRHRNIVKLICCISKEDTMLLVYEYVENHSLDRWLHRKNKSSSAVSGSVHHAVLDWPKRLHIAIGTAQGLSYMHHDCSPPIVHRDVKTSNILLDDQFNAKVADFGLARILMKPGELATMSAVIGSFGYMAPEYIQTTRVSEKIDVFSFGVILLELTTGKEANYGDEHSSLAEWAWRHHQLGSNIEELLDREVMESSNSGGMCKVFKLGVMCTATLPSTRPSMKEVLQVLLSCEEFSKGEINIGHCDDDVPFLRNSKSEHKLDIDNDT* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1856 1016 Pfam Protein kinase domain 698 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1856 1016 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 17 1009 - -
Pvu4g1856 1016 CDD STKc_IRAK 702 978 - -
Pvu4g1856 1016 ProSiteProfiles Protein kinase domain profile. 696 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1856 1016 Gene3D Ribonuclease Inhibitor 195 296 IPR032675 -
Pvu4g1856 1016 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Pvu4g1856 1016 Gene3D Ribonuclease Inhibitor 39 194 IPR032675 -
Pvu4g1856 1016 Pfam Leucine rich repeat 83 141 IPR001611 GO:0005515
Pvu4g1856 1016 SUPERFAMILY L domain-like 49 359 - -
Pvu4g1856 1016 Gene3D Phosphorylase Kinase; domain 1 673 774 - -
Pvu4g1856 1016 ProSitePatterns Protein kinases ATP-binding region signature. 702 725 IPR017441 GO:0005524
Pvu4g1856 1016 Gene3D Ribonuclease Inhibitor 526 615 IPR032675 -
Pvu4g1856 1016 Gene3D Transferase(Phosphotransferase) domain 1 775 995 - -
Pvu4g1856 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Pvu4g1856 1016 SUPERFAMILY RNI-like 297 601 - -
Pvu4g1856 1016 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 17 1009 - -
Pvu4g1856 1016 SMART serkin_6 696 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1856 1016 SMART LRR_typ_2 578 601 IPR003591 -
Pvu4g1856 1016 SMART LRR_typ_2 510 534 IPR003591 -
Pvu4g1856 1016 SMART LRR_typ_2 128 152 IPR003591 -
Pvu4g1856 1016 SMART LRR_typ_2 321 345 IPR003591 -
Pvu4g1856 1016 SMART LRR_typ_2 250 274 IPR003591 -
Pvu4g1856 1016 SMART LRR_typ_2 200 226 IPR003591 -
Pvu4g1856 1016 Gene3D Ribonuclease Inhibitor 297 525 IPR032675 -
Pvu4g1856 1016 ProSiteProfiles Leucine-rich repeat profile. 560 582 IPR001611 GO:0005515
Pvu4g1856 1016 Pfam Leucine Rich Repeat 299 321 IPR001611 GO:0005515
Pvu4g1856 1016 Pfam Leucine Rich Repeat 580 601 IPR001611 GO:0005515
Pvu4g1856 1016 SUPERFAMILY Protein kinase-like (PK-like) 696 978 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1856 Pvu-Chr4 45628716 45632774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1856 36 978 Receptor kinase-like Gene Family AT5G25930 50.157 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu4g1856 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1856 - - gmx:100798963 1597.41