Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1855 ATGAAAAAATTAACCTCATCATGTGTCAAAATGCCAATTCTCCCTCTTCTCTCCTTCCTCTTTCTTTTCTTTGCACACTCTCACTCTCACTCTTTGCTGTATGATCAAGAACATGCAGTCCTTTTGAAGATAAAACAATACCTGCAAAATCCACCATTCCTCCATCACTGGATCCCATCAAACTCCTCACATTGCACTTGGCCAGAGATCAGATGCACCAATGGCTCAGTCACTTCATTGACTATGTACAACACCAACATCACTCAAACACTTCCACCTTTCCTATGTGACCTCAAAAGCCTCACACATATAGATTTTCAGTTGAATTTCATTCCTGGGGAGTTCCCCACATCTCTCTACAACTGCTCCAAGCTTGAGTACCTTGACCTCTCACAGAACACCTTTGTTGGTAGGATTCCTGATGACATTCACCACTTGGCTAGCCTAAGTTTTCTTAGCCTTGGTGGCAACAACTTCTCTGGTGATATTCCAGCCAGCATAGGGAGGTTGAAGCAGCTAAGAAGCCTTTATCTTCATCAGTGTCTTTTCAATGGTTCTTTCCCTGCTGAAATTGGGAACTTGTCCAACCTTGAGTTGTTGCATGCTTTCTCAAACCACATGCTGCCTCCCACAAAGCTTCCATCAAGCTTGACCCAGTTGAACAAATTGAAGGTCTTTCATATGTTTGAATCAAACTTGGTAGGGGAAATCCCAGAAACCATTGGACACATGGTGGCATTGGAGAATTTGGATTTGTCAAAGAATGGTTTAAGTGGACAAATTCCCAATGGTTTGTTCATGCTGAAAAATCTGAGCATAGTATATATTTACAAGAACAGACTCTCAGGAGATATACCTGGAGTGGTTGAAGCATTCAATTTGACAGAACTTGATCTTTCAGAAAATAATCTTACTGGGAAAATACCAGATGATTTGGGAAAGCTCAGCAAGTTAACATACTTGTGTTTGTCTATGAACCAATTATCAGGGACGGTACCAGAAAGCATTGGTCGTCTACCATCTCTGACTGATTTTATTGTTTTTCTCAACAATTTATCAGGTACTCTTCCACCAGATTTTGGTAGGATCTCAAAGCTTGAAACATTTCAGGTTGCATCTAATAGTTTCACAGGAAGGTTGCCAAAGAACTTGTGCTACTATGGAAGGTTAGTTGGTTTAACTGCTTATGACAATAACCTGAGTGGGGAGTTGCCAGAATCTTTAGGAAGTTGTAGTAGCCTGCAAAATCTGTGGGTTCAAAACAACGAGCTTTCTGGCAACATTCCTAGTGGTCTATGGACATCTTTGAATTTATCAAGTATTATGATAAATGAAAACAAGTTCACTGGTCAGCTTCCTGAAAGATTGAATGAGAATATTTCAGAGCTGAGCATAAGTTACAATCAGTTTTCTGGTATAATTCCACTTGGAGTGTCTTCTTGGAAGAATATTGTGGTGTTCAATGCCAGTCACAACCTGTTCAATGGTAGTATTCCACTGGAGCTAACATCTCTTCCTCACCTAACAATTCTTCTGCTTGATCATAACCAGTTCACAGGACCACTTCCTTCAGATATAGTATCATGGAAGTCCCTAATAAATCTAGACTTAAACCACAATCAACTCTCTGGAGAAATCCCACTTGCAATTGCTCAGTTGTCTGCTCTCAATATTTTGGATTTATCAGAAAACAGAATATCTGGCCAAATCCCACTTCAACTAGCTCTTATGAGACTCACAAACATCAATCTCTCCTCCAATAATTTGGTAGGAAGGATTCCAAGTGAATTTGAAAATCTTGGGTTTGCCAGCAGCTTTTTGAACAATCCAGGTCTCTGTGCTGATACTGCAGTGCTGAACCTTATCTTGTGCAATTCCAAGCCACAAAGGGCAAGAACTGATACAAGATCTGCATCTCATGTTATAATCACAAGCCTGGTTGTAGCAGCCTCCTTGCTGGCTTTGTTGTCATCATTTTTGATGATCAGAGTTTACAGAAAAAGAAAGCAAGAATTGAAAAGGTCATGGAAGCTGACTTCCTTTCAAAGGCTTAGTTTCACAAAAGCAAATATTGTGTCCTCCTCAATGTCAGAACACAACATTATTGGCAGTGGAGGGTTTGGTGCAGTATATCGTGTTGGTGTTGGTGATTCAAACTATGTTGCAGTGAAAAAGATACGCAGTAACAGAAAGTTAGAGGAGAAGCTTGTGAGTTCATTTCTTGCAGAAGTTGAAATTCTGAGCAATATTCGCCACAACAACATTGTGAAGTTGCTATGCTGCGTCTCCAAAGAGGATTCTCTTCTCCTTGTCTACGAGTATCTCGAAAACCATAGCCTTGATAGATGGCTGCACAACAAAAGTAAGCAGATAGCTCCAGGTTCAGTCCTTGATTGGCCAAAGAGATTACATATAGCCATTGGAGCAGCACAAGGTTTGTGCTATATGCATCATGACTGCTTGCCACCTGTTGTTCATCGCGATGTGAAAACAAGTAACATTCTGTTGGATTCTAAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCCATGATGTTGATGAAGCCAGAAGAACTTGCTACCATGTCAGCTGTGGCCGGCACATTTGGCTATATTGCTCCAGAATATGCTCAAACAACAAGAGTCAATGAGAAGATAGATGTCTATAGCTTTGGAGTTGTTCTGCTGGAACTGACAACTGGAAAAGAAGCTAATCATGGAGATGAATACTCATCTCTGGCCGAATGGTCGTGGCGCCACATTGAGTTAGGGACAGATGTAGAAGATATTTTGGATAAAGAAATTAAGGAAGCTTGTTACATGGATGAAATCTGCAACATCTTCAAACTTGGGGTCATGTGCACTGCAACACTGCCAGCTAGTAGACCTTCCATGAAGGAAGTCCTGAAAATTTTGCTCAACTGCAGCAGCAATTCACTCACCATTGGAGAGAAGAATGGTATCTATGATTCTGTTCCACTTCTTAAGAATTCAAAATGGGAAAATCAGGTGGAATATTATACTGATGATGATTGA 3036 0.4055 MKKLTSSCVKMPILPLLSFLFLFFAHSHSHSLLYDQEHAVLLKIKQYLQNPPFLHHWIPSNSSHCTWPEIRCTNGSVTSLTMYNTNITQTLPPFLCDLKSLTHIDFQLNFIPGEFPTSLYNCSKLEYLDLSQNTFVGRIPDDIHHLASLSFLSLGGNNFSGDIPASIGRLKQLRSLYLHQCLFNGSFPAEIGNLSNLELLHAFSNHMLPPTKLPSSLTQLNKLKVFHMFESNLVGEIPETIGHMVALENLDLSKNGLSGQIPNGLFMLKNLSIVYIYKNRLSGDIPGVVEAFNLTELDLSENNLTGKIPDDLGKLSKLTYLCLSMNQLSGTVPESIGRLPSLTDFIVFLNNLSGTLPPDFGRISKLETFQVASNSFTGRLPKNLCYYGRLVGLTAYDNNLSGELPESLGSCSSLQNLWVQNNELSGNIPSGLWTSLNLSSIMINENKFTGQLPERLNENISELSISYNQFSGIIPLGVSSWKNIVVFNASHNLFNGSIPLELTSLPHLTILLLDHNQFTGPLPSDIVSWKSLINLDLNHNQLSGEIPLAIAQLSALNILDLSENRISGQIPLQLALMRLTNINLSSNNLVGRIPSEFENLGFASSFLNNPGLCADTAVLNLILCNSKPQRARTDTRSASHVIITSLVVAASLLALLSSFLMIRVYRKRKQELKRSWKLTSFQRLSFTKANIVSSSMSEHNIIGSGGFGAVYRVGVGDSNYVAVKKIRSNRKLEEKLVSSFLAEVEILSNIRHNNIVKLLCCVSKEDSLLLVYEYLENHSLDRWLHNKSKQIAPGSVLDWPKRLHIAIGAAQGLCYMHHDCLPPVVHRDVKTSNILLDSKFNAKVADFGLAMMLMKPEELATMSAVAGTFGYIAPEYAQTTRVNEKIDVYSFGVVLLELTTGKEANHGDEYSSLAEWSWRHIELGTDVEDILDKEIKEACYMDEICNIFKLGVMCTATLPASRPSMKEVLKILLNCSSNSLTIGEKNGIYDSVPLLKNSKWENQVEYYTDDD* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1855 1011 Pfam Protein kinase domain 698 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1855 1011 Gene3D Transferase(Phosphotransferase) domain 1 775 987 - -
Pvu4g1855 1011 SUPERFAMILY Protein kinase-like (PK-like) 674 972 IPR011009 -
Pvu4g1855 1011 Pfam Leucine rich repeat N-terminal domain 36 72 IPR013210 -
Pvu4g1855 1011 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 14 1003 - -
Pvu4g1855 1011 SUPERFAMILY L domain-like 289 601 - -
Pvu4g1855 1011 PRINTS Leucine-rich repeat signature 294 307 - -
Pvu4g1855 1011 PRINTS Leucine-rich repeat signature 553 566 - -
Pvu4g1855 1011 ProSitePatterns Protein kinases ATP-binding region signature. 702 725 IPR017441 GO:0005524
Pvu4g1855 1011 ProSiteProfiles Leucine-rich repeat profile. 293 316 IPR001611 GO:0005515
Pvu4g1855 1011 SMART LRR_typ_2 244 268 IPR003591 -
Pvu4g1855 1011 SMART LRR_typ_2 553 577 IPR003591 -
Pvu4g1855 1011 SMART LRR_typ_2 146 170 IPR003591 -
Pvu4g1855 1011 SMART LRR_typ_2 315 339 IPR003591 -
Pvu4g1855 1011 SMART LRR_typ_2 505 529 IPR003591 -
Pvu4g1855 1011 Gene3D Ribonuclease Inhibitor 540 613 IPR032675 -
Pvu4g1855 1011 Pfam Leucine rich repeat 101 159 IPR001611 GO:0005515
Pvu4g1855 1011 SMART serkin_6 696 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1855 1011 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 14 1003 - -
Pvu4g1855 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 824 836 IPR008271 GO:0004672|GO:0006468
Pvu4g1855 1011 Gene3D Ribonuclease Inhibitor 386 457 IPR032675 -
Pvu4g1855 1011 ProSiteProfiles Protein kinase domain profile. 696 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1855 1011 Gene3D Ribonuclease Inhibitor 291 385 IPR032675 -
Pvu4g1855 1011 SUPERFAMILY L domain-like 42 377 - -
Pvu4g1855 1011 Gene3D Phosphorylase Kinase; domain 1 665 774 - -
Pvu4g1855 1011 Gene3D Ribonuclease Inhibitor 34 186 IPR032675 -
Pvu4g1855 1011 Gene3D Ribonuclease Inhibitor 187 290 IPR032675 -
Pvu4g1855 1011 Gene3D Ribonuclease Inhibitor 458 539 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1855 Pvu-Chr4 45622442 45626397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1855 37 972 Receptor kinase-like Gene Family AT5G25930 51.323 0.0 937
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu4g1855 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1855 - - gmx:100785907 1662.12