Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1851 ATGTTCCATGGACAAAGTTTTTGTCATGTTGCACTGTTTCTTGCATTGAGGCCAGCAATGGGGAGAGCCACAAGGTGGATGAAGAGTTTGTTTGGGATTACAAGAGAGAAAGAGAAGAAGAAAAACTCAAAGGGTGGAGAGGCCAAGAGCACTGAATCAGGTTGTTCTGAGAGTACTAGTAATTCAAGAGCTTTGTGCCATAATCCAGGGACTATACCTCCCAACATTTCTCAAGCTGAGGCAGCTTGGTTACAGTCATTCTACACAGAGAAGGACAACAACAAGCATGCCATTGCAGTTGCTGCCGTCACTGCAGCTGCGGCGGATGCTGCTGTGGCTGCAGCACAGGCTGCTGTAGCAGTTGTTAGACTCACAAGCCAAGGAAGGGGTGGCACCATGTTTGGTGTTGGACCTGAGATATGGGCTGCTATCAAGATTCAAGCTGTGTTTAGAGGATATCTGGCAAGGAAGGCATTGAGGGCATTAAAAGGATTGGTGAAGTTGCAGGCACTTGTCAGAGGGTATTTAGTGAGGAAGCAAGCAACAGCAACCCTGCATAGTATGCAGGCTCTTGTTAGAGCTCAAGCTACACTAAGGTCCCACCAATCTCGCAGGCTCATGAGTACTAAGAATGAAGCATTTAGATCTCAACATAGAGCAAGAAGATCCATGGAGAGGTTTGATGATACTAGGAGTGATTATGCAGTTCCAATCCACATTAGAAAAGCATCATCTTCTTTTGATGCTACAGTTAACATCAACAACAGTGTTGATGGGAGCCCCAAAACAGTGGAAGTGGACACTTTCAGGCCTAAGTCAAGGTCAAGAAGGTCAAGAAGGACAATATCAGATTTTGGTGATGAGCCATCACTTCAGGCACTTTCCTCTCCCATCTTCCCAATTTCATATAGAGTTACCCCTACACGTTGGTCCATAGCAGACCAAAGGAATTTTCAGGATTCTGAATGGGGGTTAACAGGAGAAGAATGTCGGTTCTCTACAGCACAAAGCACTCCACGCTTCACAAATCCTTGTAGTTGTGGCTCAGTTGCACCTATGACAAATGATAACTTGTTCCTAAGACAATATGGGAAATTTCCAAACTACATGGCTAGTACTCAGTCTTTTAAGGCCAAGTTGAGGTCTCATAGTGCTCCAAAGCAAAGACCAGAACCAAGTCCAAGGAAAAGGCTCTCCCTCAATGAAATGATGGAGTCTAGGAGTAGCTTGAGTGGTGTTAGAATGCAGAGGTCTTGCTCAAAGGCTCAAGAAGTCATTAATTTCAAGAATGCTGTGATGGGAAAGCTTCAGAAATCCACAGAATCTGTTAGGGTGGCAGACAGAAACTATTTCCACCAGAGAGGGTGGTGA 1371 0.4508 MFHGQSFCHVALFLALRPAMGRATRWMKSLFGITREKEKKKNSKGGEAKSTESGCSESTSNSRALCHNPGTIPPNISQAEAAWLQSFYTEKDNNKHAIAVAAVTAAAADAAVAAAQAAVAVVRLTSQGRGGTMFGVGPEIWAAIKIQAVFRGYLARKALRALKGLVKLQALVRGYLVRKQATATLHSMQALVRAQATLRSHQSRRLMSTKNEAFRSQHRARRSMERFDDTRSDYAVPIHIRKASSSFDATVNINNSVDGSPKTVEVDTFRPKSRSRRSRRTISDFGDEPSLQALSSPIFPISYRVTPTRWSIADQRNFQDSEWGLTGEECRFSTAQSTPRFTNPCSCGSVAPMTNDNLFLRQYGKFPNYMASTQSFKAKLRSHSAPKQRPEPSPRKRLSLNEMMESRSSLSGVRMQRSCSKAQEVINFKNAVMGKLQKSTESVRVADRNYFHQRGW* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1851 456 MobiDBLite consensus disorder prediction 36 62 - -
Pvu4g1851 456 ProSiteProfiles IQ motif profile. 142 167 IPR000048 GO:0005515
Pvu4g1851 456 ProSiteProfiles IQ motif profile. 187 216 IPR000048 GO:0005515
Pvu4g1851 456 Pfam IQ calmodulin-binding motif 166 180 IPR000048 GO:0005515
Pvu4g1851 456 Pfam IQ calmodulin-binding motif 141 160 IPR000048 GO:0005515
Pvu4g1851 456 MobiDBLite consensus disorder prediction 262 288 - -
Pvu4g1851 456 ProSiteProfiles IQ motif profile. 163 190 IPR000048 GO:0005515
Pvu4g1851 456 Pfam Protein of unknown function (DUF4005) 335 414 IPR025064 -
Pvu4g1851 456 MobiDBLite consensus disorder prediction 48 62 - -
Pvu4g1851 456 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 20 440 - -
Pvu4g1851 456 Gene3D - 119 164 - -
Pvu4g1851 456 SMART iq_5 138 160 IPR000048 GO:0005515
Pvu4g1851 456 SMART iq_5 161 182 IPR000048 GO:0005515
Pvu4g1851 456 PANTHER IQ-DOMAIN 5-RELATED 20 440 - -
Pvu4g1851 456 MobiDBLite consensus disorder prediction 265 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1851 Pvu-Chr4 45580639 45582932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1851 20 415 IQD Protein Family AT3G16490 48.668 1.78e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1851 - - gmx:100788710 625.935