Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1850 ATGTCAAACTTGAATTACATGTTCATCTTGTTAGCAGTTCTTCTTCTTTTTCTGCAAAATTCTAGTAGAGTTCATTGTCATACCAAGGGACTTAGACCAAGGCGTTCTGAGGGTAAAGGGTTATCGACCAACATGACTAGAGTGCAATATTCTGAAGAGCAATTCATGAAATGGGTGAACTTTGTTGGTTCCCTCAAACACTCAGTTTTTAAGGCAGTGAAAAATAAGCTTGTGGCTTCCTACACTTTGCATGTTGATAAGGATCCCAGTGTTGGAGATTTTACCTCAATTCAAGAAGCCATTGATTCCCTTCCATTCATCAATCTTGTGAGAGTGGTCATAAAAGTCCATGCAGGTGTCTACACAGAGAAAGTGAACATTCCTGCTTTCAAATCCTACATAACAATAGAGGGAGATGGTGCAGAAGAAACCATTGTTAAATGGAGTGACACTGCTCAAACACCTGGTTCAAATGGGAGGCCACTAGGAACCTATGGTTCAGCAACTTTTGCAGTGAATTCACCTTATTTCATTGCCAAGAACATCACATTCCAAAACACAACTCCTGTTCCTGCTCCAGGAGCAATTGGAAAGCAAGCAGTGGCATTAAGGATTTCAGCAGACACAGCAGCATTCGTAGGCTGCAAATTCTTGGGAGCACAAGACACACTCTATGATCATGTGGGCAGACATTACTATAAGGATTGTTACATTGAAGGCTCTGTTGATTTCATATTCGGCAACTCTCTCTCACTATTTGAGGGATGTCACGTGCATGCAATAGCACAGAATACAGGGGCAGTAACAGCTCAAGGAAGGAGCAGTATGTTGGAGGACACAGGGTTCTCATTTGTGAACTGTAAGGTCACGGGATCAGGGGCACTATACCTTGGAAGGGCATGGGGACCCTTTTCTCGCGTGGTCTTTGCTTACACATATATGGACAACATCATCATTCCCAAAGGCTGGTATAACTGGGGTGACCCTAACCGTGAAATGACTGTTTTCTATGGGCAGTACAAGTGCACAGGAGCAGGTGCAAGTTTTGCAGGGAGAGTAGCATGGTCAAGAGAACTCACTGATGAAGAAGCTATACCTTTTCTTTCACTTGGTTTTGTTGATGGAACTGAATGGATCCAATTGTAG 1146 0.4302 MSNLNYMFILLAVLLLFLQNSSRVHCHTKGLRPRRSEGKGLSTNMTRVQYSEEQFMKWVNFVGSLKHSVFKAVKNKLVASYTLHVDKDPSVGDFTSIQEAIDSLPFINLVRVVIKVHAGVYTEKVNIPAFKSYITIEGDGAEETIVKWSDTAQTPGSNGRPLGTYGSATFAVNSPYFIAKNITFQNTTPVPAPGAIGKQAVALRISADTAAFVGCKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGNSLSLFEGCHVHAIAQNTGAVTAQGRSSMLEDTGFSFVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREMTVFYGQYKCTGAGASFAGRVAWSRELTDEEAIPFLSLGFVDGTEWIQL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1850 381 PANTHER PECTINESTERASE 7 380 - -
Pvu4g1850 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
Pvu4g1850 381 Pfam Pectinesterase 91 375 IPR000070 GO:0030599|GO:0042545
Pvu4g1850 381 Gene3D - 78 381 IPR012334 -
Pvu4g1850 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Pvu4g1850 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1850 Pvu-Chr4 45573085 45578206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1850 2 379 Carbohydrate Esterase AT5G47500 44.063 6.17e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1850 K01051 - gmx:100817924 719.539