Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1849 ATGGGGAACAAAATCGCGCGCACGACGCAGGTTTCGGCGTCGGAGTACTACCTCCACGACCTCCCGTCCACCTACAATCTCGTTCTCAAGGAGGCCTTAGGTCGCGGCCGTTTCTTCAAGTCCATTCAGTGCAAACACGACGAGGGTTTGGTCCTCGTCAAGGTCTATTTCAAGCGCGGCGATTTTCTTGATCTCTCCGACTACGAACGCCGTCTCTCTCAGATCAAACAAATTTTCAGCTCCATCGATCATCCTCACGTTTGGCCGTTTCAGTTTTGGCAAGAAACGGACAAAGCAGCGTACCTTTTGAGACAGTATTTCTTCCATAATCTGCATGATAGGTTAAGTACTCGACCTTTTCTTAGTCTTGTTGAGAAGAAATGGTTGGCTTTTCAGTTGCTTGTAGCTGTAAACCAGTGCCACGAGAATGGAGTATGTCACGGTGATATCAAGTGTGAGAATGTGCTGATTACCTCCTCCAATTGGCTTTACCTTGCTGACTTTGCATCTTTCAAACCCACATACATTCCGTATGATGACCCATCTGATTTCTCTTTTTTCTTTGACACTGGTGGACGAAGACTATGTTATCTTGCACCTGAGAGATTTTATGAACATGGAGGCGAGATGCAGATGGCACAAGATACCCCCTTAAAACCCTATATGGATATATTTGCTGTTGGGTGTGTAACTGCTGAGCTTTTCCTTGAGGGGCAGCCACTATTTGAACTGTCTCAACTTCTTGCTTATCGCAGAGGGCAATATGATCCAAGTCAACACCTTGAAAAAATACCGGATATTGGAATCCGTAAAATGATATTGCACATGATTCAGTTAGAACCCGAGTCCCGATTTTCTGCTGAAAGATATCTGAAGGAATATGCTGCAGTTGTTTTTCCGATTTATTTTTCACCATTTCTTCATGATTTTTACCGTTGCTGGAGTCCTCTTCATTCTGACATGAGGGTTTTACTATGCCAAAGTGCTTTTCCGGAGATACTCAAACAAATGATGAACAATAAGCCATCTGATGATGCAGGTGCTAATTCCGGGGAACTTTTGGAAGAGATGGTTGCTAAAGAAAGTGTGAGTTTCTTGAAGGATTCACTGAGGAAGAGAGAAGACATAGGCAAAGGCTTAGTCCATGATAACTATGAAGTTCTTGGTGATATTAATGGCATACCGAGGGATGCGAAAAGAAATAATAATCCATCCGATGTAGCAGGAAAGGCACATAATTCAACTTTCCCCGAAAATCTAACAAATCTTCAAACTGATACATTTGGAATGCCTTTTCTACCGTTACCAAAGGATAGTATGAGATGTGAAGGCATGGTTTTGATAACTTCTTTGCTGTGCTCTTGCATACGCAATGTCAAGTTGCCTCACCTGAGGAGGGCAGCTGTACTCTTGTTGAAGGCTTCTGCTCTATATATTGATGATGAAGATCGTTTGCAGCGTGTTATACCATATGTGATTGCAATGCTTTCAGATGCAGCAGCAATTGTCCGTTGTGCTGCTTTGGAGACTTTGTGTGACATTCTTCCCTTAGTGAGGGATTTTCCTCCCAGTGATGCGAAGATATTTCCTGAGTATATTTTTCCAATGCTTTCTATGCTTCCTGATGATCCTGAGGAAAGTGTGAGGATATGCTATGCCAGCAATATAGCTAAACTGGCGTTGACTGCTTATGGATTTCTGATACACTCAGTAAGCTTGAGTGAGGCAGGTGTCCTTGATGAATTGAGTTTGTCACAGAAACCATTGACATCATCCACTCAGACCTCTGGAAGAATGAAGAGGATAAATGGTGATGTTCAACTTCTGCAGCTGAGGAAATCCATTGCGGAGGTTGTCCAAGAACTTGTTATGGGTCCTAAGCAAACCCCAAATATAAGGAGAGCACTTCTTCAGGATATTGGCAAACTGTGCTACTTCTTTGGTGTGAGACAGAGTAATGACTCTCTTTTACCCATTCTTCCTGCTTTCTTAAATGATCGGGATGAGCAATTAAGGACAGTATTCTATGAAAAAATAGTTTATGTCTGCTTTTTTGTGGGGCAAAGAAGTGTAGAAGAATATTTATTACCTTATATTGAGCAAGCTTTAAGTGACATGACAGAATCAGTCATTGTTAAAGCCGTAGAATGTATGTCTATTCTATGTAAAAGTGGTTTCTTCCGGAAGAGAACATTGCTTCAAATGATAGATCGTGGCTTTCCTTTATTGTGTTATCCTAGTGAATGGGTACGGAGATCAGTTGTCTCTTTTATTGCTGCTAGCAGTGAGTGCCTGGGTGAAGTAGATTCTTATGTTTACCTTTCTCCTGTTATACGGCCTTTCCTCCGCAGGCAACCTGTGTCTCTTACTTCCGAAAGGGATCTGCTTTCATGTTTAAAACCTCCTGTCTCAAGACAGGTTTACTATGAAGTCTTGGAGAACTCTAGGAGTTCAGACATGTTAGAAAGACAAAGAAAAATATGGTATAGTTCTTCACAGTCTAAACTATGGGAAATGGATTTACTGAAAAAAGGAATTGAAGAGTTGGACTCATTGAAGAACTGGAGTGACAAGCAACAAGGTCCTGGGGTTCAACAAACTGTCGGCACTGCCTTCCAACAGCCAGGGATAACTGATTGTGACAAAGCTGAGGCAAAATTGAGAGATATGGGAGCCTTTATGCATAATGATAGCAATGTGGGGCATCGTGATACCCAAGGCTTGGAGAAGTTACAGTTTTCAGGATTTATGTCACCAAATTTTAGTGGCGTGAACAGTTTGACGTTTGAAAAGCCATCAGAAGGCATACCTCTGTACTCCTTCAGTGTGGACAGGCGAGGAATGGGAGTGCCCCCTGCTGCATCTGATCCTCCATTGCCAATGAATTCTCTGGGTGTTAGTTCATCTGCAATGCCTTGGGTTAATCCACTTAGCAAGTCCTTTAATTTGGCTAGTTCAGTTCCAGCACCAAAGCTTTTTTCTGGTTCTTTTAGTATCAGCAATGGCTCTAAACAGTTCCATCGAGTGGTACATGAACCAGATGCAAGGGAAAATGAGACGGCCTATATTAATAGCACATTTCAAGATTTGGGATCATCTGCTAATGTTAAAGGTACTTCAATTGCACTGGAAGATGCAACTGCCCAAACTGATCTATCAGGATTTCCATCCTTTGCTCGAGCTTCCATACCCGATTCTGGTTGGAGGCCCCGAGGGGTGTTGGTTGCACACCTCCAGGAGCACCGATCAGCTGTCAATGACGTTGCTATATCTGCTGACCATAGTTTCTTTGTGAGTGCATCTGATGATTCTACAGTCAAGATTTGGGATTCCAGAAAGCTAGAAAAGGACATTTCATTCAGGTCTAAGCTAACTTATCACCTGGAGGGAAGCCGTGTGTTGTGTGCAGCAATGCTTCCAGGTTCTGCTCAAGTTATAATTGGAGCATCTGATGGATTTATTCATATGTTTTCTGTTGATCATATATCTAAAGGTCTAGGACACGTTGTCGAGAAATATTCTGGAATTGCTGATATCACAAAGAAGGATATCAAAGAAGGTGCCGTACTCAACCTCTTGAACTGCCCTGTGGATAATTATACCATTATGTATAGCACACAGAATTGTGGCATTCATCTGTGGGATACTAGGTCAAATTCCAATACCTGGAATCTTAAAGCTACTCCTGAGGAGGGCTATGCTTCTTCTCTAGCATCAGGGCCTTGTGGTAATTGGTTTGTATCAGGGTCATCCCGGGGGGTTATTACACTTTGGGACCTGAGGTTTCTTATACCTGTTAACTCTTGGCAGTATTCTCTTGCTTGCCCTATAGAAAAGATGTGTCTCTTTCTTCCTCCGTCAAATGCTTCTCTGTCTTCAGCTGCTAGACCCCTTGTTTATGTGGCTGCTGGTTGCAATGAAGTTTCTCTTTGGAATGCGGAGAATGGTAGCTGCCACCAGGTCCTAAGGATGGCCAATTATGACAGCGATGCCGAAATGTCTGATCTGCCTTGGGCCTTGGCCAGACCTTCAGGTAAGCCAACTTCTCAATCAGATCTAAGACGGAATGTTAATCGGAAGTATGGAGTTGATGAGGTAAACGAACCTCCTTCTCGTCTTCCTGGTATCCATTCGTTACTTCCCTTGCCTGGGGGCGATTTGTTGACTGGAGGCACTGATTTAAAGATACGTCGGTGGGATCATTACAGTCCTGACAGAAGTTACTGTATTTGTGGACCAAACATAAAAGGAATAGGAAATGATGATTTTTATGAAACAAAATCTAGTTTTGGGGTGCAAGTTGTACAGGAGACAAAAAGACGTCCTCTTACAATCAAGCTGACAGCAAAGGCGATTCTTGCGGCTGCTGCCACTGATTCTGGTGGTTGCCATCGTGACTCCATTGTTTCTTTGGCTTCTATTAAGTTAAACCAGAGACTCTTACTTTCAAGTGGTAGAGATGGGGCCATCAAGGTTTGGAAGTAA 4485 0.429 MGNKIARTTQVSASEYYLHDLPSTYNLVLKEALGRGRFFKSIQCKHDEGLVLVKVYFKRGDFLDLSDYERRLSQIKQIFSSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPFLSLVEKKWLAFQLLVAVNQCHENGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDDPSDFSFFFDTGGRRLCYLAPERFYEHGGEMQMAQDTPLKPYMDIFAVGCVTAELFLEGQPLFELSQLLAYRRGQYDPSQHLEKIPDIGIRKMILHMIQLEPESRFSAERYLKEYAAVVFPIYFSPFLHDFYRCWSPLHSDMRVLLCQSAFPEILKQMMNNKPSDDAGANSGELLEEMVAKESVSFLKDSLRKREDIGKGLVHDNYEVLGDINGIPRDAKRNNNPSDVAGKAHNSTFPENLTNLQTDTFGMPFLPLPKDSMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSDAAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYIFPMLSMLPDDPEESVRICYASNIAKLALTAYGFLIHSVSLSEAGVLDELSLSQKPLTSSTQTSGRMKRINGDVQLLQLRKSIAEVVQELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDSLLPILPAFLNDRDEQLRTVFYEKIVYVCFFVGQRSVEEYLLPYIEQALSDMTESVIVKAVECMSILCKSGFFRKRTLLQMIDRGFPLLCYPSEWVRRSVVSFIAASSECLGEVDSYVYLSPVIRPFLRRQPVSLTSERDLLSCLKPPVSRQVYYEVLENSRSSDMLERQRKIWYSSSQSKLWEMDLLKKGIEELDSLKNWSDKQQGPGVQQTVGTAFQQPGITDCDKAEAKLRDMGAFMHNDSNVGHRDTQGLEKLQFSGFMSPNFSGVNSLTFEKPSEGIPLYSFSVDRRGMGVPPAASDPPLPMNSLGVSSSAMPWVNPLSKSFNLASSVPAPKLFSGSFSISNGSKQFHRVVHEPDARENETAYINSTFQDLGSSANVKGTSIALEDATAQTDLSGFPSFARASIPDSGWRPRGVLVAHLQEHRSAVNDVAISADHSFFVSASDDSTVKIWDSRKLEKDISFRSKLTYHLEGSRVLCAAMLPGSAQVIIGASDGFIHMFSVDHISKGLGHVVEKYSGIADITKKDIKEGAVLNLLNCPVDNYTIMYSTQNCGIHLWDTRSNSNTWNLKATPEEGYASSLASGPCGNWFVSGSSRGVITLWDLRFLIPVNSWQYSLACPIEKMCLFLPPSNASLSSAARPLVYVAAGCNEVSLWNAENGSCHQVLRMANYDSDAEMSDLPWALARPSGKPTSQSDLRRNVNRKYGVDEVNEPPSRLPGIHSLLPLPGGDLLTGGTDLKIRRWDHYSPDRSYCICGPNIKGIGNDDFYETKSSFGVQVVQETKRRPLTIKLTAKAILAAAATDSGGCHRDSIVSLASIKLNQRLLLSSGRDGAIKVWK* 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1849 1494 Pfam HEAT repeat 488 516 IPR000357 GO:0005515
Pvu4g1849 1494 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1078 1110 - -
Pvu4g1849 1494 PANTHER PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4 1 1494 IPR045162 GO:0004674|GO:0016236|GO:0045324
Pvu4g1849 1494 CDD STKc_Vps15 16 303 - -
Pvu4g1849 1494 SMART WD40_4 1119 1158 IPR001680 GO:0005515
Pvu4g1849 1494 SMART WD40_4 1454 1494 IPR001680 GO:0005515
Pvu4g1849 1494 SMART WD40_4 1222 1259 IPR001680 GO:0005515
Pvu4g1849 1494 SMART WD40_4 1366 1400 IPR001680 GO:0005515
Pvu4g1849 1494 SMART WD40_4 1071 1110 IPR001680 GO:0005515
Pvu4g1849 1494 MobiDBLite consensus disorder prediction 396 416 - -
Pvu4g1849 1494 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1849 1494 Pfam Protein kinase domain 29 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1849 1494 Gene3D - 441 571 IPR011989 -
Pvu4g1849 1494 SMART serkin_6 27 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1849 1494 Gene3D - 1180 1270 IPR015943 GO:0005515
Pvu4g1849 1494 Gene3D - 572 786 IPR011989 -
Pvu4g1849 1494 Pfam WD domain, G-beta repeat 1074 1110 IPR001680 GO:0005515
Pvu4g1849 1494 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1461 1494 - -
Pvu4g1849 1494 ProSiteProfiles HEAT repeat profile. 656 694 IPR021133 -
Pvu4g1849 1494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pvu4g1849 1494 Gene3D - 1279 1494 IPR015943 GO:0005515
Pvu4g1849 1494 Gene3D - 1003 1179 IPR015943 GO:0005515
Pvu4g1849 1494 SUPERFAMILY ARM repeat 445 781 IPR016024 -
Pvu4g1849 1494 Gene3D Transferase(Phosphotransferase) domain 1 22 299 - -
Pvu4g1849 1494 SUPERFAMILY Protein kinase-like (PK-like) 26 322 IPR011009 -
Pvu4g1849 1494 SUPERFAMILY WD40 repeat-like 1072 1494 IPR036322 GO:0005515
Pvu4g1849 1494 ProSiteProfiles Trp-Asp (WD) repeats profile. 1477 1494 IPR001680 GO:0005515
Pvu4g1849 1494 ProSiteProfiles Trp-Asp (WD) repeats profile. 1078 1110 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1849 Pvu-Chr4 45547268 45557344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1849 26 291 EF-hand Containing Proteins AT5G23580 25.448 2.25e-09 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_Pl-Tthe Pvu4g1849 Pkinase 1.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1849 K08333 - gmx:100818467 2771.5