Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1831 ATGAGAAGTTCAATTGGGTTCATATTGTTGCTCACACTTTGTGTTGTCCTCGTAGCTTTAGTTCACGCACAGCAACAAATAGGCTTTATAAGCATTGATTGCGGTAGTTGGCAAGATTTTTACACGGATGAAGAAATTAATATAAAGTACACCGCTGATGGAGGCTATATACAAAGTGGGGTTAATAGGAACATCTCCTCTGAGTATGCATACCCAAACAATCCCACTCTGGCACAAATACTCTCAGATGTCAGAAGTTTTCCCCACGGGGAAAGGAACTGTTATAGTTTAACATCTCTAAGAAGTGGCAGTTTGTATTTAATCAGGGCTTCCTTCATGTATGGAAACTATGATGGAGAAAACAAGCTTCCAGAGTTTGATGTTTATGTTGATGTCGATTTCTGGTCAACAGTGAAATTTAGAAATGCCTCAGAGGAAGTTGTACTTGAAATAATCAGTTTTGCACAATCAGATGTGATATATGTTTGCCTTGTGAACAAGGGAGCAGGAACTCCTTTTATCTCAGGATTAGATGTTAGACCACTTAATAGTTCTATTTATGGCACTGAGTTTGGGGAATCTGCTTCTCTAACACTTTTCAAACGATGGGACATTGGGTCACTCAATGGAAGTGGTAGATATGAGGATGATGTTTATGATAGAATCTGGTCCCCTTTCAATTCTTCATCCTGGGATTCTGTCAGCACTTCCACGGCAATAAATGTCAATGATGATGGCTTTAGACCACCATTTGAAGTTATTAGGACTGCTGCAAGACCAAGGAATGGCAGTGATACTTTGGAGCTTTCTTGGACCCCAGATGATCCAAGTTGGAAATTTTATGTCTACTTGTACTTTGCTGAAGTGGAGCAGCTTGAGAAAACCCAGCTGAGGAAATTCAATATATCTTGGAATGGATCTCCATTGTTTGATTCCATAGTACCCCGCCACTTGTTTGCAACCACCCTTTCTAATTCAAAATCTTTGGTGGCAAATGAACATCGTATTTCCATACACAAAACAAGAGATTCAACCCTTCCACCCATTCTTAATGCAGTTGAGATTTATGTAGTGAAGCTAGATGGACTTGCAACATTTGAAGAAGATGTTGATGCTATGTTGGATATAAAGGAAAGCTATAGAATTCAAAGAAATTGGGTGGGTGATCCATGTGAGCCAAAGAACCATTCTTGGGAAGGCTTAAAATGCAACTATAGCACTTCACTTCCTCCCCGAATTATCTCTCTGAATATAAGCTCCAGCAGTTTAAGTGGAGCAATAACTTCTTCCATTTCCAATCTCTCCTCGCTGGAATCTTTGGACTTGCACAACAATAGCTTAACGGGAGCAATACCTGAGTTCTTGGAAGAATTGAAATCCCTTAAATATTTGGACTTAAAGGACAATCTATTTTCGGGTTCAGTTCCTGACACTCTTTTAGAAAGATCAAGGGATGGCTTACTTACATTGAGGGTGGATGATCAAAATCTTGGTGGCTCAGGAGGGAACAGTAAAACTGTTAAAATTGTTGTTCCCATAGTGGTATCAGTATCAGTTTTAGTTATATTGGTTGCTTTCATTCTCTTTTGGAAATTTAGAAGAAATGAACGATCAGATGAGGAGATCAGTATGCTCAACAAAAGAGGGAAAAATGTAACAACGAAGAACTGGCAATACACATATTCGGAAGTCATGGAGATCACCAACAACTTTGAAATGGTCATTGGCAAGGGAGGATTTGGAACTGTGTACAGTGGGCAGATGAAAGATGGCAAAGAAGTTGCAGTGAAGATGCTTTCTCCATCGTCAACTCAGGGCCCTAAAGAATTTCAAACTGAGGCTGAGCTTTTGATGACAGTTCATCACAAAAATTTGGTATCTTTCATTGGTTATTGTGATGATGATAACAAGATGGCTCTCATATATGAGCACATGGTCAATGGCAGTCTGAAAGATTTTCTCTTTCTCTCAGATGGAAATTCAGATTGCTTGAGTTGGGAAAGAAGAATACAGATAGCAATCGATGCCGCTGAGGGGTTGGATTACCTACACCATGGTTGCAAGCCACCAATAATACACAGGGATGTAAAGTCAGCAAACATTCTTTTAAGTCAAGATTTAGAAGCCAAGATAGCAGATTTTGGCCTCTCCAAGGAGTTTAGGAAAGATAACCAAAAAGAACAATCTCATGTGATTTATACTGATGCTACAGATGAAAAATCTGCAATAATGGGCACAACAGGGTACCTTGACCCAGAGTACTACAGATCAGGGAGCCTTAATGAGAAAAGTGACATATTTAGCTTTGGAATTGTTCTACTTGAATTGATCACAGGTCGTCCTGCAATATTCAAAGGCAACAAAATAATGCACATACTTGAGTGGATAAGACCTGAGCTTGGAAGAGGAGAATTGAGTAAAATTTTAGATCCAAGGCTCCAAGGAAAATTTGGTGCAAATTCTGGGTGGAGAGCTTTAGGAATAGCAATGGCATGTTCTGCATCAACCTCCATTCAGAGACCTACAATGAGTGTTGTCATAGCAGAGTTAAAGCAGTGTTTGGCAATAGAATCTCCTAGTGACACTGAAACATTTGTGCCCCCTCCTAAACAAGTCTACACCGAATTCTACAGTTCATCAGAAGCATATTCTTATGATAGTGAATCTATCACCTATCCTTTCCCAAGATAG 2691 0.3954 MRSSIGFILLLTLCVVLVALVHAQQQIGFISIDCGSWQDFYTDEEINIKYTADGGYIQSGVNRNISSEYAYPNNPTLAQILSDVRSFPHGERNCYSLTSLRSGSLYLIRASFMYGNYDGENKLPEFDVYVDVDFWSTVKFRNASEEVVLEIISFAQSDVIYVCLVNKGAGTPFISGLDVRPLNSSIYGTEFGESASLTLFKRWDIGSLNGSGRYEDDVYDRIWSPFNSSSWDSVSTSTAINVNDDGFRPPFEVIRTAARPRNGSDTLELSWTPDDPSWKFYVYLYFAEVEQLEKTQLRKFNISWNGSPLFDSIVPRHLFATTLSNSKSLVANEHRISIHKTRDSTLPPILNAVEIYVVKLDGLATFEEDVDAMLDIKESYRIQRNWVGDPCEPKNHSWEGLKCNYSTSLPPRIISLNISSSSLSGAITSSISNLSSLESLDLHNNSLTGAIPEFLEELKSLKYLDLKDNLFSGSVPDTLLERSRDGLLTLRVDDQNLGGSGGNSKTVKIVVPIVVSVSVLVILVAFILFWKFRRNERSDEEISMLNKRGKNVTTKNWQYTYSEVMEITNNFEMVIGKGGFGTVYSGQMKDGKEVAVKMLSPSSTQGPKEFQTEAELLMTVHHKNLVSFIGYCDDDNKMALIYEHMVNGSLKDFLFLSDGNSDCLSWERRIQIAIDAAEGLDYLHHGCKPPIIHRDVKSANILLSQDLEAKIADFGLSKEFRKDNQKEQSHVIYTDATDEKSAIMGTTGYLDPEYYRSGSLNEKSDIFSFGIVLLELITGRPAIFKGNKIMHILEWIRPELGRGELSKILDPRLQGKFGANSGWRALGIAMACSASTSIQRPTMSVVIAELKQCLAIESPSDTETFVPPPKQVYTEFYSSSEAYSYDSESITYPFPR* 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1831 896 Pfam Leucine rich repeat 415 470 IPR001611 GO:0005515
Pvu4g1831 896 SUPERFAMILY L domain-like 369 480 - -
Pvu4g1831 896 PANTHER BNAC07G41790D PROTEIN 9 861 - -
Pvu4g1831 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 691 703 IPR008271 GO:0004672|GO:0006468
Pvu4g1831 896 ProSiteProfiles Protein kinase domain profile. 569 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1831 896 Pfam Protein kinase domain 573 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1831 896 CDD STKc_IRAK 575 852 - -
Pvu4g1831 896 SMART serkin_6 569 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1831 896 Pfam Malectin-like domain 32 357 IPR024788 -
Pvu4g1831 896 PANTHER OS07G0107800 PROTEIN-RELATED 9 861 - -
Pvu4g1831 896 ProSitePatterns Protein kinases ATP-binding region signature. 575 597 IPR017441 GO:0005524
Pvu4g1831 896 Gene3D Ribonuclease Inhibitor 368 485 IPR032675 -
Pvu4g1831 896 SUPERFAMILY Protein kinase-like (PK-like) 553 887 IPR011009 -
Pvu4g1831 896 Gene3D Phosphorylase Kinase; domain 1 543 644 - -
Pvu4g1831 896 Gene3D Transferase(Phosphotransferase) domain 1 645 864 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1831 Pvu-Chr4 45377480 45382880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1831 8 857 Receptor kinase-like Gene Family AT4G29180 52.244 0.0 875
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu4g1831 Malectin_like 4e-106 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1831 - - gmx:100793137 1446.03