Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1820 ATGGGTCGGCGAAAGAGCAACAATAATCAGTGTTCGTCAAGCAAGGAAGACACCACCATGAGTAGCCACCTTCGCTTTGAGGATGCCGAGGAAGCTGTCGAAGAGAGTTCCAACCTCGACCAATCCATGTGTGACATCGCTGAATCCGATGATAAAACCAGTGCCGACTACTATTTTGATTCCTACTCTCATTTTGGAATTCATGAAGAAATGTTGAAGGACACTGTGAGAACTAAGACATATCAAAATGTTATTTACCAGAATAAGTTTCTATTCAAGAATAAAGTAGTTCTGGATGTTGGAGCTGGGACTGGGATTTTATCACTATTTTGTGCCAAAGCGGGGGCAGAACATGTCTATGCGGTTGAGTGCTCCCACATGGCTGACATGGCAAAGGAGATTGTTGAAACTAATGGTTTCTCTAATGTTGTTACTGTTCTGAAGGGGAAAATTGAGGAAATTGAGCTTCCAGTTGCTAAAGTTGATATAATAATTTCAGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAATTCCGTGCTCTATGCACGTGACAAATGGCTTGCGGATGATGGAGTTGTACTACCAGATAGAGCATCCCTCCACCTCACTGCCATTGAAGATGCAGACTACAAAGAAGATAAAATTGAGTTTTGGAACAATGTATATGGATTTAACATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCTCTTGTTGACACAGTTGACCAGAATCAGATTGCTACAAATTGCCAACTACTCAAGACCATGGATATCTCAAAGATGGCTCCTGGAGATGCTTCATTCACAGCACCTTTTAAGCTCGTAGCTGAACGTGATGACTATATTCATGCCCTTGTTGCATATTTTGATGTATCGTTCACAAAGTGTCATAAATTGATGGGCTTCTCTACAGGACCAAAATCACGAACTACACATTGGAAACAAACAGTCCTATATCTGGAAGATATCTTGACCATTTGTGAGGGGGAGGCAATTGTAGGAAGCATGACTGTTGCACCAAATAAAAAGAATCCCCGGGATGTTGATATAATGGTTAAGTATTCATTGAATGGAAAGCGATGCAATGTTTCAAGGGTTCAGTACTACAAGATGCGTTGA 1131 0.4094 MGRRKSNNNQCSSSKEDTTMSSHLRFEDAEEAVEESSNLDQSMCDIAESDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKNKVVLDVGAGTGILSLFCAKAGAEHVYAVECSHMADMAKEIVETNGFSNVVTVLKGKIEEIELPVAKVDIIISEWMGYFLLFENMLNSVLYARDKWLADDGVVLPDRASLHLTAIEDADYKEDKIEFWNNVYGFNMSCIKKQAIMEPLVDTVDQNQIATNCQLLKTMDISKMAPGDASFTAPFKLVAERDDYIHALVAYFDVSFTKCHKLMGFSTGPKSRTTHWKQTVLYLEDILTICEGEAIVGSMTVAPNKKNPRDVDIMVKYSLNGKRCNVSRVQYYKMR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1820 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 38 376 IPR025799 GO:0016274|GO:0018216
Pvu4g1820 376 CDD AdoMet_MTases 97 197 - -
Pvu4g1820 376 Pfam Ribosomal protein L11 methyltransferase (PrmA) 91 167 - -
Pvu4g1820 376 Gene3D - 200 376 - -
Pvu4g1820 376 MobiDBLite consensus disorder prediction 1 19 - -
Pvu4g1820 376 MobiDBLite consensus disorder prediction 1 41 - -
Pvu4g1820 376 Gene3D Vaccinia Virus protein VP39 46 198 IPR029063 -
Pvu4g1820 376 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 55 356 IPR025799 GO:0016274|GO:0018216
Pvu4g1820 376 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 375 IPR029063 -
Pvu4g1820 376 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 38 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1820 Pvu-Chr4 45315621 45318974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1820 6 339 C2H2 Transcription Factor Family AT3G12270 36.464 2.26e-66 219