Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1814 ATGGCGGCGGTGGCCGTCACAAGGTTGAAGAGGGAACAATGCAACCGCACAAAGCACGATTCCAGCTTCTCCCATTGGAAGATTCTGATTGGCCCTTCTGATTGGGAAGATCATTCCAGAGGAAAGGAAGGGTGTGCAAGATACAGGATTCATAACCTCCCTCAGGAATCGAATCCAGGGGTGTATGAGCTTGGAATTGCGGTGGCCGGTGGTGGTTTGGGGCGTCAAATTTCCAAGCTTGCCCCTCACCCTGATCGCATTGTGGTGGTTTACCTTGGACAAGCTGACAATGTGAGAACAAGACTCCAGTGTTATGGCAGAACAGGAGCTCACTTGGAAAGTGCCATTTCAGATGATTCTTCTCTCCAAAAGGGTCTTCCCTTGTTTCAGAAAGTGTTTTCACAAGGATTCTCAATCGTTTATCGATGGGCTCCGACTCAAAACAAGGAAGATGCCCTGCGAACAGAAGATCAGCTGCTCAGAACATTTGATTATGCATGGAACACAAGCAATAATGGTATCCGGAGGCCTGAAGAAATTCTTCAAAAGCTTAAAAAAATTGCTTCAGGCACCAGAACACTTTCAGATGTGGCCAAAGTGCTACTACCATTCACTCAGAAGCAAGTGGGCATCCGAATTAAATCTTGCAAGCTACCTCAGGATGATGACAATGGCAGCTATAATTTCATAACTCGAGTATTCAGCTTTAACAGATCACGTCCTAGGATAGTTCAAAGTACCAGTGGTGTCGTTCAGGAACAGGAGAATGCTAAAATCTGTGGAGTTTCATTGGGTGATGGTTTACTTTGTAGAAGGCCACCAGCTGAGAAAAGATTGAGGTGTTCTGAACACAAAGGAATGAGAGCTAATGTTTCCATTGCCAAAGCAATCAGTGTAGCCAAGTCAGAGAGCAATGTTCCACAAACAGTGGTTGGGAGTCCTGTTGATGAAAGCATGACAAACACCAATATATGTGGAATCATCTTAAATGATGGCTCCACCTGCAGAAGGCAACCAGTTGAAGGAAGGAAAAGGTGTCATGAGCACAAAGGGAGGAGAATTGGTGCATCTGTTCAAAAAAGGGGCAACGGATACAGATACCAAAATGTTAGCCATGGTGTAGAAGATTCTCTACAAACACTGGTAGGGAGTCCTGTGGATGAGAGTATCTCAAACACAATTTGTGGAATCATCTTAAATGATGGCTCTGCCTGTACAAGACAACCAGTTAAAGGAAGAAAAAGGTGCCATGAGCACAAAGGGAGAAGAACTCGTGCATCTTTTCATGTAAATCAGAAATAA 1302 0.4455 MAAVAVTRLKREQCNRTKHDSSFSHWKILIGPSDWEDHSRGKEGCARYRIHNLPQESNPGVYELGIAVAGGGLGRQISKLAPHPDRIVVVYLGQADNVRTRLQCYGRTGAHLESAISDDSSLQKGLPLFQKVFSQGFSIVYRWAPTQNKEDALRTEDQLLRTFDYAWNTSNNGIRRPEEILQKLKKIASGTRTLSDVAKVLLPFTQKQVGIRIKSCKLPQDDDNGSYNFITRVFSFNRSRPRIVQSTSGVVQEQENAKICGVSLGDGLLCRRPPAEKRLRCSEHKGMRANVSIAKAISVAKSESNVPQTVVGSPVDESMTNTNICGIILNDGSTCRRQPVEGRKRCHEHKGRRIGASVQKRGNGYRYQNVSHGVEDSLQTLVGSPVDESISNTICGIILNDGSACTRQPVKGRKRCHEHKGRRTRASFHVNQK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1814 433 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 384 427 - -
Pvu4g1814 433 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 3 365 - -
Pvu4g1814 433 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 384 427 IPR038909 GO:0003677|GO:0006355
Pvu4g1814 433 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 3 365 IPR038909 GO:0003677|GO:0006355
Pvu4g1814 433 Pfam GIY-YIG domain-containing protein 23 181 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1814 3 423 HRT Transcription Factor Family AT5G56780 38.382 1.38e-96 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Pvu4g1814 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1814 - - gmx:100784450 596.275