Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1791 ATGGCAGCAAGTTCATCAAACTCAGGAAGGGGAAAAGGCATGGTTGAAGGAAAGAAAGAAGCAAAGGAAATCCAATTCAACGATGAGTTGCAGCTTGAGTTCATACTTGATGCAGGAATTGTGAAAGACTGCGAATTGAGTTTGCCCTATGGGGTGCAACTGACCAATGACAAGTGGAACCTGTTCTTGCCATTGCTAGGGTTTGAAGAAACCCTAATAGGGTTTTTGAAGGAAGAAGAAGATGTGAGAGAAGGGATCCAAGTGAACGTTTATGACAGAGGAGGCCATGAATTCGAAATGATGCTGAAGAAATGGGTGAAAGACTCAAATGAGTTCTACGTGCTCAACAGAGGGTGGTTCAGTTTCTGCAACCAACATGGTTTGGGGCAAGAAGATCTCATAGCTTTGCGCGGTTTTCGCCATTCCATAACAGACATGTTATCTTTTGTTGTTACTTTCAGAAGAATGAGGTAA 474 0.4283 MAASSSNSGRGKGMVEGKKEAKEIQFNDELQLEFILDAGIVKDCELSLPYGVQLTNDKWNLFLPLLGFEETLIGFLKEEEDVREGIQVNVYDRGGHEFEMMLKKWVKDSNEFYVLNRGWFSFCNQHGLGQEDLIALRGFRHSITDMLSFVVTFRRMR* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1791 157 ProSiteProfiles B3 DNA-binding domain profile. 87 157 IPR003340 GO:0003677
Pvu4g1791 157 SUPERFAMILY DNA-binding pseudobarrel domain 79 152 IPR015300 -
Pvu4g1791 157 Gene3D - 45 157 IPR015300 -
Pvu4g1791 157 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 19 155 IPR005508 GO:0003677
Pvu4g1791 157 CDD B3_DNA 75 155 IPR003340 GO:0003677
Pvu4g1791 157 PANTHER B3 DOMAIN PLANT PROTEIN 19 155 - -
Pvu4g1791 157 Pfam B3 DNA binding domain 81 139 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1791 Pvu-Chr4 45102397 45102870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1791 57 153 B3 DNA Binding Superfamily AT4G03170 31.633 2.71e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pvu4g1791 B3 2.6e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1791 - K10737 pvu:PHAVU_004G169500g 187.963