Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1787 ATGGCTTCTACAATTCGTCCCTCTCTTTCTTCCTTCATGTTACCCTCCCTCTCTTCTTGCAACCCTTCTCAAAAACTCTCTCTTTTTCATCTTGGTAGCGGTATTAGACGGTTACATAATTTTGGCTTGAAAGCCTCTAAGTTTTTGAGACATGATGATGACTGCATGACAACGAAGGCATCTATGAACACGTCCTCAGCTGCTGCACAGGAAAATGCACTGGATTGGGTCAAACATGACAAGAGAAGAATGCTTCATGCTGTGTATCGTGTTGGGGACTTAGACAAGACCATAAAATTTTATAAAGAGTGTCTCGGAATGAAGTTGCTCAGAAAGCGTGACATGCCAGAGCAGAGACATACTAATGCCTTTCTTGGATATGGGCCTGAGGATGCTCACTTTGCTGTTGAACTGACATACAATTATGGGATTGACAAGTATGACATTGGAGATGGATTTGGTCATTTTGGTCTTGCTTTTGATGATATTTCAAGAATAGTGGAACTTGTCAGAGCTAAGGGTGGCAAAATTACCAGAGAGCCTATGCTTGTCAAGGGAAGCAACTCAGTAATTGCATATATTGAAGATCCTGATGGTTATCAATTTGAACTTTTGGAAAGGGCTCCCTCTCCGGAGCCTTTGTACAAAGTAATGCTTCGAGTTGGTGATCTTGACCGTTCCATCAAATTTTATCAGAAGGCTTTTGGCATGGAGCTACTTCGAACACAAGATGATCCAGAATCCCAGAACACAACAGCAATAGTGGGATATGGTCCAGAGGAAAAAAGTGCTGTACTGGAGTTGACTTACAACTATGGAATCACAGAATATGATAAAGGAGATGCTTATGCTCAGATTGCAATTGTTACAGATGATGTGTACAAAACTGCAGAAGCAATTAAACTTGCTGGTGGGAAGATTATTCGGGAACCAGGACCAATACTTGACACAAAGATAAAGATCACAGCATGTGTGGATCCTGATGGTTGGAAAACTGTTTTTGTAGATAATATTGACTTTAAGAAGGAGTTGGAGATCAAAATTTGA 1047 0.4078 MASTIRPSLSSFMLPSLSSCNPSQKLSLFHLGSGIRRLHNFGLKASKFLRHDDDCMTTKASMNTSSAAAQENALDWVKHDKRRMLHAVYRVGDLDKTIKFYKECLGMKLLRKRDMPEQRHTNAFLGYGPEDAHFAVELTYNYGIDKYDIGDGFGHFGLAFDDISRIVELVRAKGGKITREPMLVKGSNSVIAYIEDPDGYQFELLERAPSPEPLYKVMLRVGDLDRSIKFYQKAFGMELLRTQDDPESQNTTAIVGYGPEEKSAVLELTYNYGITEYDKGDAYAQIAIVTDDVYKTAEAIKLAGGKIIREPGPILDTKIKITACVDPDGWKTVFVDNIDFKKELEIKI* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1787 348 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 83 207 IPR037523 -
Pvu4g1787 348 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 11 345 - -
Pvu4g1787 348 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 217 337 IPR029068 -
Pvu4g1787 348 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 213 337 IPR037523 -
Pvu4g1787 348 PANTHER LACTOYLGLUTATHIONE LYASE 11 345 - -
Pvu4g1787 348 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Pvu4g1787 348 TIGRFAM glyox_I: lactoylglutathione lyase 214 343 IPR004361 GO:0004462|GO:0046872
Pvu4g1787 348 TIGRFAM glyox_I: lactoylglutathione lyase 71 214 IPR004361 GO:0004462|GO:0046872
Pvu4g1787 348 CDD GlxI_Ni 84 205 - -
Pvu4g1787 348 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 217 331 IPR004360 -
Pvu4g1787 348 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 84 204 IPR004360 -
Pvu4g1787 348 Gene3D - 210 345 IPR029068 -
Pvu4g1787 348 Gene3D - 55 209 IPR029068 -
Pvu4g1787 348 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 83 209 IPR029068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1787 Pvu-Chr4 45054544 45058123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1787 214 334 Calmodulin-binding Proteins AT1G08110 27.027 2.83e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1787 K01759 - gmx:100802155 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1787 4 45054544 45058123 Pvu4g1787 4 45054544 45058123 ECH
Pvu2g3195 2 47210613 47214578 Pvu4g1787 4 45054544 45058123 PCT