Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1785 ATGGAGCGCATCATCGGCGCCAAGTTCAAGCTAGGTCGCAAGATCGGAAGCGGATCCTTCGGCGAAATCTACCTCGCGACGCATATTGATACCTTCGAAATCGTCGCGGTCAAGATCGAGAACAGTAAAGCGAAGCATCCGCAATTGCTTTACGAGGCCAAGCTCTACAATATTCTTCAAGGAGGAAGTGGCATCCCGAGCATAAAATGGTGTGGTGTAGACGGAGAGGATAATGTGCTTGTTATGGATTTGCTGGGACCTAGTCTTGAGGATCTTTTTGTTTACTGTGGAAGAAAGTTCTCCCTCAAAACCGTGTTGATGTTAGCTGATCAAATGTTGACTAGAATTGAATATGTGCATTCTAAAGGATACCTACACAGGGATATAAAACCTGACAACTTTCTCATGGGACTTGGTCGGAAGGCGAACCAGGTTTACATAATTGATTTTGGGCTTGCAAAACGATATAGGGACCCCGCAACTAATCGCCATATTCCTTACAGGGAAAACAAAAACTTAACAGGGACTGCACGCTATGCAAGTTGCAATACTCATCTTGGGGTTGAGCAAAGTCGACGGGATGATTTGGAATCACTTGGATATGTGCTTCTGTATTTTCTCAGAGGAAGCCTTCCTTGGCAAAACCTAAAGGCTGCAACAAAGAAGCAAAAGTATGATAAGATATGTGAGAAGAAACTAGGAACTCCTATTGAGGTTTTATGCAAAACTCATCCTGTTGAGTTTGCTTCATACTTTCATTATATTCACTCTCTGACATTTGATCAGCGACCTGATTATGGATTCTTGAAGCGTCTAATTCGGGATCGATTTGCTCGAGAAGGTTATGAATTTGATTATGTATTTGATTGGACTATTTTAAAGTACCAGCAGGCACAAAAGAATAGAGTCCAGCCTCGCATGTCTACGGTCCCTGGAGCAAGCATCAGTCCTGCAATGCCAATGGATGTGGACAACAATCGAGGTATTAATGCTTATTCAGGGGATGTCTCAGCTGAACGCATTAAATCAGGCAATGTAACTGGTTCCGGTGTTAAAATTCAATTTAAATCATCTGGGATAAAAAATTTGGGTTCTGAAAAGCCTCTTGACAAGAATATTTTTGGTGAAGCACATATACCCTCTACCTCATACTCTCTTGCTGGCACCTCAAAAAGGAACTCTTTGAAGCCTGCCTTGTCCACTGAAGCTGCCAACCCGGTAAATGGGCAAGGAAGTAATAAAATCGGCCCTTCAAGTAGCTGGATTTCATCTGTGCAACGCATATCTTCTGCCAAATGA 1299 0.428 MERIIGAKFKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKAKHPQLLYEAKLYNILQGGSGIPSIKWCGVDGEDNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMLTRIEYVHSKGYLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDPATNRHIPYRENKNLTGTARYASCNTHLGVEQSRRDDLESLGYVLLYFLRGSLPWQNLKAATKKQKYDKICEKKLGTPIEVLCKTHPVEFASYFHYIHSLTFDQRPDYGFLKRLIRDRFAREGYEFDYVFDWTILKYQQAQKNRVQPRMSTVPGASISPAMPMDVDNNRGINAYSGDVSAERIKSGNVTGSGVKIQFKSSGIKNLGSEKPLDKNIFGEAHIPSTSYSLAGTSKRNSLKPALSTEAANPVNGQGSNKIGPSSSWISSVQRISSAK* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1785 432 PANTHER CASEIN KINASE-RELATED 1 409 - -
Pvu4g1785 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pvu4g1785 432 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Pvu4g1785 432 MobiDBLite consensus disorder prediction 402 432 - -
Pvu4g1785 432 Gene3D Transferase(Phosphotransferase) domain 1 1 319 - -
Pvu4g1785 432 PANTHER CASEIN KINASE 1-LIKE PROTEIN 3 1 409 - -
Pvu4g1785 432 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pvu4g1785 432 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1785 432 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1785 432 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1785 Pvu-Chr4 45043922 45047816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1785 8 213 MAP Kinase Kinase Kinase AT1G54960 28.054 4.64e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pvu4g1785 Pkinase 1.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1785 K08960 - gmx:100798768 804.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1785 4 45043922 45047816 Pvu4g1785 4 45043922 45047816 ECH
Pvu2g3198 2 47227601 47233044 Pvu4g1785 4 45043922 45047816 PCT