Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1758 ATGAATAGAGGTGTTCTTCAGAGCTCACCAGTGCAACAAATGATCACTGGAAACCCTAACTGGTGGAACATCAATATCAATAGCATGCCTCCACAAGCTCCTCCTTTCTTCTCCACCACTCCTTCAAACTTTCCCATCCCTTATGCTCCCACTTCTCTTCCCTTTCCTTCTTGGAATGAGAATCAAGAGCTTCCTGAATCATGGAGCCAGCTACTCATGAGTGGGGTGGTGGATGAACAAGGTAAGGTTGGGATGGGCCAGTTTCAGAGCAAGAAGTTGGAGAACTGGGAGGATCAAATGCTAGCTCAGGCTCCAAACGCTTCTCTTGTTGATGTTAAACAAGAAAATTCAGCTAACAGCTACGTATATGGCCATGGAAACGAAGAGCTTCAGTCATCAAAACCATCTTGGTCTCCAAAATCATGTGTCACAAGTTTCAGTAGCAGCATGTTAGATTTCTCTAACAGCAACACAGATGCAAGGCATCCACCACCAGATCGATCTTCTGAGTGCAATAGCAGTGCAGCTGGTGGGGCACTGAAGAAAGCTAGGGTTCAACCCTCTGGCACAACACAGGCCACATTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAGCTCGTTTCCCCATTTGGGAAGACTGACACAGCCTCTGTCTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGCTTACCATACTTGAGTGGTGGACCAGGGAATGGGAGGCAGCAGAATTCTGTTCAAGGAGAGAAGAATTGTATATTCCCTGAAGACCCTGGTCAGCTGCTGAATGAGAACTGCTTGAAAAGGAAAGCAGCAGGAGAACCGGATACTCAGGAAGAACAACAGAAGGGGCTGAGGAGTAGAGGGTTGTGTCTGGTTCCTGTGTCATGCACACTGCAAGTTGGGAGTGACAATGGAGCAGACTATTGGGCCCCTGCCCTAGGAGGGGGCTTTCGTTAG 1002 0.476 MNRGVLQSSPVQQMITGNPNWWNININSMPPQAPPFFSTTPSNFPIPYAPTSLPFPSWNENQELPESWSQLLMSGVVDEQGKVGMGQFQSKKLENWEDQMLAQAPNASLVDVKQENSANSYVYGHGNEELQSSKPSWSPKSCVTSFSSSMLDFSNSNTDARHPPPDRSSECNSSAAGGALKKARVQPSGTTQATFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSGGPGNGRQQNSVQGEKNCIFPEDPGQLLNENCLKRKAAGEPDTQEEQQKGLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1758 333 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 196 246 IPR036638 GO:0046983
Pvu4g1758 333 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 235 IPR011598 GO:0046983
Pvu4g1758 333 MobiDBLite consensus disorder prediction 154 192 - -
Pvu4g1758 333 MobiDBLite consensus disorder prediction 154 175 - -
Pvu4g1758 333 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 319 - -
Pvu4g1758 333 PANTHER OS05G0228400 PROTEIN 16 319 - -
Pvu4g1758 333 Gene3D - 191 245 IPR036638 GO:0046983
Pvu4g1758 333 CDD bHLH_AtbHLH_like 194 243 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1758 Pvu-Chr4 44824929 44829812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1758 1 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.602 2.09e-69 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1758 - - gmx:100786555 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1758 4 44824929 44829812 Pvu4g1758 4 44824929 44829812 ECH
Pvu2g3206 2 47298494 47302270 Pvu4g1758 4 44824929 44829812 PCT