Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1746 ATGTATAGACCATTCATGACATGTGATGATCCAAAAGGGGTAGTTGAGTGTGGGGCTATAAGGAAATACAGGACCAGTTCACAGAAAATGAAGGACAAGACAAAAACTAGGAGGCCGGCTGAGACATCATTGGCTAACAAACAAGACAAAGAGGAGAAGGTTTCAAAAGGATCCGCAGAAAGGTGTTTTGATCCATCATCCTTGCAGCTCATGGAGGTATCTAGAGGGGCTCAAAGGTTGAACAACATGATTGATTCATGGTCTAGGGGTCTTAGGTATGATGGAAGTTCTGAAGATATAGCAAAAGATTTGCTAAAAGGGGCTCTTGACCTGCAAGAATCTCTACTAATGCTGCGCAAGGTGCAAGAAGCTTCACAACACATGGCTAGCTTGAAGAGAAGACAAAATGGGAAACCTGAAAGAGGGAGATTTGATGAAATGCCGATGGATGGAACTGCACATTGTGATCATTTTGGTGAACAAAGTTATCCAATGGGATTCCAAAGACATTGGCCTTCAGCTGATGGTTCTTCAAGTAGTTGCACTGAGGAGCTTAAGAAAGTGATCAAGGAGAGCCTGATTAGCCAAAATTTGTTCACTACCACTGAAGGGTTGGATTCAGCATCCACATTCCACTCCACAAACTCAAGCCAATCTTCTGTGGCTTGGAATGATAAGCTTTCTGATTCTTCTTTCTCACCAACAACTTCAAGGAGGGAAAGACGATCCAATCTGGTTGCCAAGCTGATGGGTTTAGAAGAAGCACCTTCAAGATCATTTCCAGCTGTTATGCAGAAACAGTTGGAGAGTCCAAAGATTCTGAATCAGAAGAGACATGTATTTGACATAGATATGCCTAAACTGAGAAAAAATGTTGAGAAGGTTAATCTAGAACGTAAGATGACCTTGAAGGAAATCCTTGAGACTACTCATTTCAATGGACTTTTGAAGAAGAGTCCTGTGAGAGAGCCTAATGTTCAGGTCCATCATTCCATTGATCCGCACTACAAACATTGTGGTGATTTACCCCCTATTGTACTTATGAAACCTCGATGTACTCCATACCAGGAATGTGTAAACAGTTACCAGCATGTTGTTCCTTCAGAAAAGTTATCCCTTAGAAATCTAAAAGCAAAAGTTGGCACTTCCAAAGTGTTCCAACCCAAGGAAGACTCAACCGTGGGGAAAAGAATGGAAGAACATGTATCCAGAAGGCTTGCCAAAGAGGAAAGAACTAAACTCCTCAGAGAGCTTGTGGAGTTGAAGGAAAAAGAAATCAAGCCTCTTGGAAACGAGAAGGCCCTTGAAGGTAAGGTAAAACTGCCTAGTCATGTCAGTCACAAATCACATGTAAATGAAACTGTTGATAGAAAATCTAAGGTAAAGACCATTGCCCCAAGTAGAAAGATGTCAGAAAAGGAGGTTTCAAAATCCAAACATCAACAAAAAACTCTTGTCCCAGTAGTTGAGGTTTCCAAAACCAAAGTTGTGACAAAATCCCAAGAAGATCAAGCAGAAATCAGCTCTACAAGTACCAAGATTAGGAAGCCACAAAGTGGCTCCCGAATTGAAAAGAATGAGATTCCCAGCAGAAAGAGCACTGTTTCAAATTCAAATACCATCTCAAAACCAAAGAGCCAAAAGATTAGTTATTCCAAGGAACAGAAAAAGAAACAGATGAAGAAGCAAAGGCCTGCTGTTGCTGAGCCTGAAGCAGCTAAACCAGTTGATGAACAATTAGGCCAAGAAGAAGCAATTAGTGTGGCTGTTTCTCATAAAGATGATTGCCCTGAGATTAGAATAATAACTACAATAACACATCATCTTGAGATGGAGCATGAAGAAGTATATGCATCTGCAAATAAGATTAGAGAAGTTTGTGAGCAAAACCAGAGTTCTTCTAGTGATGATTATTTTATGCTCAAGTCTGAACGTGAAAATGATGCCATTCTTGCTGAGAAAGCTCATGACAGTATCAATATCAGTGAAACCTATTGCAAGCCTGACAAAGAGAGTTCTGAGCTTAAATATTTGCTTCTAACAAGTCAATCATTTATTGAGCATGCAGAGAAGCTCCTCAATCTTGATGCTGACTGTCCCAAGCTCCTACCAAAAAGTGAAACTAAGGAAATAGCCAATCTCACACTCTATTTGGACTGTGCAAATGAAGTCACTGAGCTTAAAAGCCTTCAGGGATCACAAGCAGTTAACCCTTTATTGTTAACTTGTGCTGGGAATCCAAGATTGCACACTTCTTTAGGTAGGTTGGTTGATGAAGTCTGTAATGCCATTGAGCATCTAACATCTTACAGTGAAAAACTAGCTTCAGATAACATATATGCAATGATGGAGAGAGATATAAAGGGAAACAATGGACTGATAAATGGAATATGGAACTGGGGTTGGAGGCATGGATTTTCTGCAGATGAAGCTGAGCAAGTTGTCATTGAAGTAGAGAACCTAGTTTTAGGTGGATTGATTGAAGAGGTAATTGTAAATTTATGA 2505 0.402 MYRPFMTCDDPKGVVECGAIRKYRTSSQKMKDKTKTRRPAETSLANKQDKEEKVSKGSAERCFDPSSLQLMEVSRGAQRLNNMIDSWSRGLRYDGSSEDIAKDLLKGALDLQESLLMLRKVQEASQHMASLKRRQNGKPERGRFDEMPMDGTAHCDHFGEQSYPMGFQRHWPSADGSSSSCTEELKKVIKESLISQNLFTTTEGLDSASTFHSTNSSQSSVAWNDKLSDSSFSPTTSRRERRSNLVAKLMGLEEAPSRSFPAVMQKQLESPKILNQKRHVFDIDMPKLRKNVEKVNLERKMTLKEILETTHFNGLLKKSPVREPNVQVHHSIDPHYKHCGDLPPIVLMKPRCTPYQECVNSYQHVVPSEKLSLRNLKAKVGTSKVFQPKEDSTVGKRMEEHVSRRLAKEERTKLLRELVELKEKEIKPLGNEKALEGKVKLPSHVSHKSHVNETVDRKSKVKTIAPSRKMSEKEVSKSKHQQKTLVPVVEVSKTKVVTKSQEDQAEISSTSTKIRKPQSGSRIEKNEIPSRKSTVSNSNTISKPKSQKISYSKEQKKKQMKKQRPAVAEPEAAKPVDEQLGQEEAISVAVSHKDDCPEIRIITTITHHLEMEHEEVYASANKIREVCEQNQSSSSDDYFMLKSERENDAILAEKAHDSINISETYCKPDKESSELKYLLLTSQSFIEHAEKLLNLDADCPKLLPKSETKEIANLTLYLDCANEVTELKSLQGSQAVNPLLLTCAGNPRLHTSLGRLVDEVCNAIEHLTSYSEKLASDNIYAMMERDIKGNNGLINGIWNWGWRHGFSADEAEQVVIEVENLVLGGLIEEVIVNL* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1746 834 MobiDBLite consensus disorder prediction 25 59 - -
Pvu4g1746 834 MobiDBLite consensus disorder prediction 497 579 - -
Pvu4g1746 834 PANTHER OS01G0228800 PROTEIN-RELATED 1 832 - -
Pvu4g1746 834 MobiDBLite consensus disorder prediction 207 241 - -
Pvu4g1746 834 PANTHER OS01G0228800 PROTEIN 1 832 - -
Pvu4g1746 834 MobiDBLite consensus disorder prediction 549 568 - -
Pvu4g1746 834 MobiDBLite consensus disorder prediction 501 517 - -
Pvu4g1746 834 MobiDBLite consensus disorder prediction 25 60 - -
Pvu4g1746 834 MobiDBLite consensus disorder prediction 207 240 - -
Pvu4g1746 834 Coils Coil 404 424 - -
Pvu4g1746 834 MobiDBLite consensus disorder prediction 444 483 - -
Pvu4g1746 834 MobiDBLite consensus disorder prediction 444 480 - -
Pvu4g1746 834 MobiDBLite consensus disorder prediction 530 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1746 Pvu-Chr4 44679381 44683522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1746 668 831 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 32.000 4.19e-20 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1746 - - gmx:100797863 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1746 4 44679381 44683522 Pvu4g1746 4 44679381 44683522 ECH
Pvu2g3215 2 47354309 47358009 Pvu4g1746 4 44679381 44683522 PCT