Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1727 ATGCCGCGATCCAATTCCGCCGTGCACCACCACCGGCAGAGCTCCGACAACTTCATCCTCGACGCTCACAGAAGCTGGTTACAGTCTTCGACTTTCGCGCAGGAGTTCGGGACTCGATCTTCGAGCTTGAGGAAAATCGGCGATGATCATGTTTCGAGCAGTGGCTTGCTTGATCTGCATTCCTTAGATACCGAGCTTTTACCCGAGATGTATGGTGATCACAATGAATACTTCACTAATCACACTGTTCGGGGACAAAGTTATGATGGCTATGAGTCAATCCTCTCTGGTAACAAACACGTACAAAGGACTCGGGGATTGCCTGAGAACAATTTTCTGAAAAGTGTCCCAACTGAAAAAGAGAGAGCAAACAATGTTGCCAAGATTAAAGTTGCGGTTCGGAAGAGACCCCTTAATAAGAAGGAAACAGCAAAGAGAGAGGAAGACATTATTTCTATAGATTCAAACTTTCTCACAGTCCATGAAAGAAAACTCAAGGTGGACTTAACAGAATATGTTGAGAAACATGAATTTGTCTTTGATGCTGTGCTGAATGAAGATGTTTCAAATGATGAAGTATATGCTGAGACTGTGGAGCCTATTGTTCCACTGATTTTCCAACGAACAAAAGCAACTTGCTTTGCATATGGTCAAACTGGCAGTGGGAAGACATATACTATGCAACCATTGCCTCTCAAAGCTTCCCAAGATATTTTAAGATTAATGCACCACACCTACTGGAACCAAGGTTTCCAATTGTTTGTTAGCTTCTTTGAAATATACGGGGGAAAACTTTTTGATCTCCTCAATGATAGAAAAAAACTTTGCATGAGGGAGGATGGGAAACAACAGGTTTGCATTGTTGGCTTGCAAGAGTATAGAGTATCTAAAGTAGAGACAATCAAGGAATTTATCGAGAAAGGAAATGCCTCAAGAAGTACTGGCACAACTGGAGCAAATGAGGAATCCTCTCGATCACATGCTATACTTCAGCTTTGCATTAAGAGATCAGCTGGTGGGACTGAATCAAAGCCTGCTCGACTTGTGGGCAAACTATCTTTTATAGATCTGGCTGGAAGTGAACGAGGTGCAGATACTACAGACAATGACAAGCAGACTAGAATTGAAGGGGCCGAAATAAATAAAAGCTTACTTGCTCTGAAAGAATGCATTAGAGCTCTAGACAACGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACGGAAGTTTTGCGTGATTCTTTTGTTGGTAATTCGCGCACTGTAATGATATCATGCATTTCACCTAGCTCAGGTTCATGCGAGCATACTCTTAACACATTAAGATATGCTGACAGAGTGAAGAGCTTGTCAAAAGGGAACCACTCTAGAAGGGATCCTCTTTCTTCCTCAAACATTAGAGAGTCCACTCTGTTGCCTGGGTCCTCAATTTTAGCTCATGATGATACCTTGGAGGAAGAAATAACGTATGTCTCCAGTGACAAGAATCGATTTGGTTGGCCCAAATATCCAGAAAGAGAACCCTCTCCACCAAATAATGTGGACCATGTTCCAAGTGGTAAAATGGGGGGAAATTTGGCGCCATCTGTGTATTCTGACCCACCAAACGGTCAAAGAGGTAGTCAAAATGACAGAACTGCAAATGAACATGATTACCTAGGACCCATATATGAACAAGACAGAACAAGAAAAACAAACAAGCGAGTGGATGACGACCAGTTATCTGCTGTGGACAAGAAGATAGAATCTCGTGTTAATGTTGATGCATCGCATTTTCAGACTAATCATTCTGATCCGGATGATAATTTAAATGCCCTCCTGAAGGAAGAGGAAGATCTAGTAACAACTCATCGTAGACAGGTGGAGGAAACCATAGACATTGTCAGGGAGGAGATGAATTTACTTCTTGAGGCGGACCAACCAGGAAATCAATTGGATGATTATATTTCCAAATTGAATACCATTTTATCACAAAAGGCTACAGGAATCTTTCAATTGCAGACACGGTTGGCTCAGTTTCAGAGACGTTTAAAAGAGTATAATGTTTTCGTATCTTCTGGTAATTGA 2070 0.4179 MPRSNSAVHHHRQSSDNFILDAHRSWLQSSTFAQEFGTRSSSLRKIGDDHVSSSGLLDLHSLDTELLPEMYGDHNEYFTNHTVRGQSYDGYESILSGNKHVQRTRGLPENNFLKSVPTEKERANNVAKIKVAVRKRPLNKKETAKREEDIISIDSNFLTVHERKLKVDLTEYVEKHEFVFDAVLNEDVSNDEVYAETVEPIVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDILRLMHHTYWNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSKVETIKEFIEKGNASRSTGTTGANEESSRSHAILQLCIKRSAGGTESKPARLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNHSRRDPLSSSNIRESTLLPGSSILAHDDTLEEEITYVSSDKNRFGWPKYPEREPSPPNNVDHVPSGKMGGNLAPSVYSDPPNGQRGSQNDRTANEHDYLGPIYEQDRTRKTNKRVDDDQLSAVDKKIESRVNVDASHFQTNHSDPDDNLNALLKEEEDLVTTHRRQVEETIDIVREEMNLLLEADQPGNQLDDYISKLNTILSQKATGIFQLQTRLAQFQRRLKEYNVFVSSGN* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1727 689 Pfam Kinesin motor domain 134 450 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1727 689 MobiDBLite consensus disorder prediction 496 572 - -
Pvu4g1727 689 ProSiteProfiles Kinesin motor domain profile. 128 451 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1727 689 CDD KISc_KIF2_like 128 449 - -
Pvu4g1727 689 ProSitePatterns Kinesin motor domain signature. 350 361 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu4g1727 689 PANTHER KINESIN-RELATED PROTEIN 6 38 687 - -
Pvu4g1727 689 MobiDBLite consensus disorder prediction 450 469 - -
Pvu4g1727 689 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 451 IPR027417 -
Pvu4g1727 689 PRINTS Kinesin heavy chain signature 208 229 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1727 689 PRINTS Kinesin heavy chain signature 317 334 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1727 689 PRINTS Kinesin heavy chain signature 351 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1727 689 PRINTS Kinesin heavy chain signature 401 422 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1727 689 MobiDBLite consensus disorder prediction 555 572 - -
Pvu4g1727 689 Gene3D Kinesin motor domain 109 454 IPR036961 -
Pvu4g1727 689 SMART kinesin_4 126 457 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1727 689 Coils Coil 619 639 - -
Pvu4g1727 689 PANTHER KINESIN-LIKE PROTEIN 38 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1727 Pvu-Chr4 44490441 44495810 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1727 127 451 Calmodulin-binding Proteins AT5G65930 34.925 6.61e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1727 K10393 - gmx:100783382 1194.87