Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1718 ATGGCAAGTCTCAACACTGGCTCCAGCCCCTCAGAATCCTTTGACCAGATTCCAACAGTAAAGTTTACCAAGCTTTTCATCAATGGAGAATTTGTGGATTCTGTTTCAGGAAAAACGTTTGAGACTGTTGATCCAAGAACAGAAGAAGTGATTGTTGAAATAGCAGAGGCTTCCAAAGAAGATGTTGATATTGCTGTGAAGGCTGCACGTGAAGCATTTGATATTGGTCCATGGCCACGCATTCCCGGTGCTGAAAGAGCCAAGATTATGCTGAAATGGGCACAACTAATTGAACAGAATGTAGAAGAAATAGCAGCATTGGACACTATTGATGGAGGAAAGCTATTCAGTTGGTGTAAGGCTGTGGATGTTCCTGAAGCCTGCAACATCCTACGTTACTATGCTGGGGCTGCTGACAAAGTTCATGGAAATGTGTTCAAAACATCTCGTGACCTCCACTTGTATTCTCTTATGGAACCTGTTGGTGTTGTTGGTCACATTATCCCTTGGAATTTCCCTACTATCATGTTCTTCGCCAAGGTCGCCCCGGCCTTGGCTGCTGGTTGCACCATGGTCATCAAGCCTGCTGAGCAAACACCTCTCTCATCACTCTTCTATGCTCATCTTGCTAAGTTGGCTGGTATCCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCTCAACTGCAGGGGCTGCAATAAGCTCACATATGGACATTGATGCGGTTAGTTTTACAGGTTCAACAGAAACAGGTCGTAAAATAATGCAGGCTGCGGCATTGAGCAACTTGAAACCTGTTTCTCTTGAATTAGGAGGAAAGTCGCCAGTTTTGATTTTTGAGGATGCTGATATAGATAAAGCTGTTGATCTTGCTCTCTTTGGCATCCTACACAACAAGGGAGAAATCTGTGTTGCATTCTCTAGAGTTTTTGTCCAGGAAGGGATATATGATGAATTTGAGAAAAAGATAGTCGAGAAGGCTAAAACTTGGGTAGTAGGAGACCCTTTTGATCCAAAAGTTCAACAGGGACCCCAAACTTGTAAGGAACAGTTTGATAAAATTCTTTCCTATATTAAGCATGGAAAGAGTGAAGGAGCCTCACTGTTGACTGGGGGTAAGCCAGTGGGCAACAAGGGATACTATATTGAGCCAACCATTTTTACCAATGTTAAGGAGGACATGCTAATTGCACAAGAGGAAATATTTGGACCTGTGATGACACTTTCTAAGTTCAACACCATTGAGGATGCAATTAAGAAAGCCAACAGCTCCAAATATGGCCTAGCAGCAGGGATTGTGACCAAGAACTTGGATATTGCCAACACTGTATCAAGGTCCATCCGTGCAGGCATCATTTGGATCAACTGCTTCTTTGCATTTGATATTGACTGCCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGATTATGGACTTGAAGCACTTCATAAGTATCTTAAAGTTAAATCTGTTGCAACTCCTATTTACAATTCTCCTTGGCTTTGA 1512 0.4279 MASLNTGSSPSESFDQIPTVKFTKLFINGEFVDSVSGKTFETVDPRTEEVIVEIAEASKEDVDIAVKAAREAFDIGPWPRIPGAERAKIMLKWAQLIEQNVEEIAALDTIDGGKLFSWCKAVDVPEACNILRYYAGAADKVHGNVFKTSRDLHLYSLMEPVGVVGHIIPWNFPTIMFFAKVAPALAAGCTMVIKPAEQTPLSSLFYAHLAKLAGIPDGVLNVVPGFGSTAGAAISSHMDIDAVSFTGSTETGRKIMQAAALSNLKPVSLELGGKSPVLIFEDADIDKAVDLALFGILHNKGEICVAFSRVFVQEGIYDEFEKKIVEKAKTWVVGDPFDPKVQQGPQTCKEQFDKILSYIKHGKSEGASLLTGGKPVGNKGYYIEPTIFTNVKEDMLIAQEEIFGPVMTLSKFNTIEDAIKKANSSKYGLAAGIVTKNLDIANTVSRSIRAGIIWINCFFAFDIDCPFGGYKMSGFGRDYGLEALHKYLKVKSVATPIYNSPWL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1718 503 SUPERFAMILY ALDH-like 18 499 IPR016161 GO:0016491
Pvu4g1718 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
Pvu4g1718 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 8 503 - -
Pvu4g1718 503 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE 8 503 - -
Pvu4g1718 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
Pvu4g1718 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Pvu4g1718 503 Pfam Aldehyde dehydrogenase family 31 493 IPR015590 GO:0016491
Pvu4g1718 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1718 Pvu-Chr4 44444006 44447858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1718 16 503 Aldehyde Dehydrogenase Gene Family AT3G24503 68.916 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1718 K12355 - gmx:100784449 937.562
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3230 2 47469524 47474952 Pvu4g1718 4 44444006 44447858 PCT