Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1717 ATGGCTGCTCTCTCTAATGGCAACCAACCTTCTTCTTCCTTCAATACTCCTTCCATCAAGTTCACCAAACTCTTCATCAATGGCCAATTTGTTCATTCTCTTTCAGGGAAAGAATTTGAGACAATAGATCCAAGGACAGAGGAAGTGATTGCGAAGATCGCAGAAGGAGGAAAGGAAGACATTGATGTTGCTGTGAAAGCGGCACGTGCCGCTTTCGACCACGGTCCATGGCCTCGCATGCCCGGCGCGGAAAGAGCAAGAATTATGATGAAATGGGCAGACTTAATTGAGCAAAACATAGATGAAATAGCAGCATTGGAAGCCCTTGATGCTGGGAAGTTGTACCACTTTTGTAAGGCTGTTGACATTCCTTCAGCAGCAAATACCATACGTTACTATGCTGGTGCTGCAGATAAAATCCACGGGGAGGTCTTGAAAGCTTCTAGAGAGCTCCATGCATATACTTTGCTAGAACCAATTGGTGTTGTGGGGCACATTATTCCCTGGAACTTCCCTACCACCATGTTTGTTGCCAAGGTTAGTCCTTCCTTGGCTGCAGGTTGCACAATGGTCCTCAAGCCTGCTGAACAAACACCTCTCTCAGCCTTGTTTTATGCTCATCTATCTAAATTGGCTGGAATTCCAGATGGAGTACTTAATGTAGTACCTGGATTTGGTCTAACTGCAGGTGCTGCAATATGCTCACACATGGACATTGATAAGGTAAGCTTTACAGGTTCAACAGAAGTGGGGCGTGAAGTAATGCGTGCTGCAGCTAATAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGCAAGTCACCCATGATAGTTTTTGATGATGCTGATGTAAATAAAGCTGCTGAGCTTGCTCTCTTGGGCTTCGTATTCAATAAGGGAGAAATCTGTGTTGCAGGTACCCGTGTGCTCGTTCAAGAAGGAATTTACGATGAATTTGAGAAGAAACTGGTGGAGAAAGCAAAAGCTTGGGTGGTTGGTGATCCTTTTGATCCTAAAGTTCAACAAGGGCCTCAGGTTAACCAGAAGCAATTTGAAAGGATCCTTTCCTATATTGAACTTGGAAAGACAGAAGGGGCCACCCTTTTGACAGGTGGAAAAAGAGTGGGAAACAAGGGTTACTACATTGAACCTACGATTTTCTCCAATGTTAAGGAGGACATGAGAATAGTGCAGGAGGAGATATTTGGCCCTGTGATGGTTTTGATGAAGTTTAAGACTATTGAGGATGCAATTAAGAGTGCCAATAACACTAAGTATGGTCTAGCATCAGGCATTGTGACCAAGAGTTTGGACACAGCCAACACTGTGTCAAGGTCCATTCGTGCAGGCATTGTGTGGATCAACTGCTACTTTGCCTTCGGAAATGACATTCCTTATGGAGGGTACAAGATGAGTGGATTTGGAAGAGATTTTGGATTGGAAGCCCTACACAAGTATCTGCAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1509 0.4387 MAALSNGNQPSSSFNTPSIKFTKLFINGQFVHSLSGKEFETIDPRTEEVIAKIAEGGKEDIDVAVKAARAAFDHGPWPRMPGAERARIMMKWADLIEQNIDEIAALEALDAGKLYHFCKAVDIPSAANTIRYYAGAADKIHGEVLKASRELHAYTLLEPIGVVGHIIPWNFPTTMFVAKVSPSLAAGCTMVLKPAEQTPLSALFYAHLSKLAGIPDGVLNVVPGFGLTAGAAICSHMDIDKVSFTGSTEVGREVMRAAANSNLKPVSLELGGKSPMIVFDDADVNKAAELALLGFVFNKGEICVAGTRVLVQEGIYDEFEKKLVEKAKAWVVGDPFDPKVQQGPQVNQKQFERILSYIELGKTEGATLLTGGKRVGNKGYYIEPTIFSNVKEDMRIVQEEIFGPVMVLMKFKTIEDAIKSANNTKYGLASGIVTKSLDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKMSGFGRDFGLEALHKYLQVKSVVTPIYNSPWL* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1717 502 SUPERFAMILY ALDH-like 16 498 IPR016161 GO:0016491
Pvu4g1717 502 Pfam Aldehyde dehydrogenase family 33 492 IPR015590 GO:0016491
Pvu4g1717 502 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 5 502 - -
Pvu4g1717 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 26 490 IPR016162 GO:0016491
Pvu4g1717 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 272 461 IPR016163 GO:0016620
Pvu4g1717 502 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 502 - -
Pvu4g1717 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 268 275 IPR029510 GO:0016491
Pvu4g1717 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 296 307 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1717 Pvu-Chr4 44427945 44433648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1717 11 502 Aldehyde Dehydrogenase Gene Family AT3G24503 69.777 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1717 K12355 - gmx:100783920 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3232 2 47477556 47480195 Pvu4g1717 4 44427945 44433648 PCT