Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1713 ATGGACGACATGGAAGACGACGCAAGGTACCCTCCCAAGTCCTTCTCTCTTAACCGTCAGAACCCCTCTCACCGACACAAACACCCCGTACGCGCCGCCCCTTACCACCGCCCAATGCCCACGCGCTACGACCAGTCCGTCGTCGACGACGACGACGACGACGATGAAGAAAACGAACACGAAGATTTCAACGACGACAACGACGAAGGCGAAAACGGCTACGACGAAAACGACGTCGTCGGGTATCCCCGGATCCCGAAGAAGCGCAAGGTGCTAGTTGCGCCGGGATCCTACGAATTCGCGCCGCGTTTCAAATTGTCGTACGGTTCGCGCGGTTCGGGTTCTTCCGGGGAAGAGTGGAGCGATCACGAGACTTTCGTGCTGCTGGAGGTGTGGGGGGACAAGTTCCTCCAGCTCGGGAGGAACAGTTTGAGGTCGGAGGAATGGCGCGAGGTTGCCGAAAAGGTTTCGGAGGAATTGAAAACGGATAGAAGCGTGACGCAGTGTAGGAGCGTGCTGGACAAGCTGAAGAGAAAGTACAAGAAGGAGAAAACCAAAATGGATGAAATGGGAATGGGCTCTTGCAAATGGGCCTTCTTCAAGAAGATGGACATGTTGATGGCATCTTCTGCAAGGCAGGAGTATGGCCTTGCGTGTGGGGTGGATTCTGGGGAGTATGTGTTTATGAACACTAGGATTTACTTGAACAGGTCCAATGGATTTGATGAGATGAGGGACAGTCCAGGGGAGTCTGAGAGTGATGATGATGATGAAGAGGAAGAGGAATGTGGTGGTGGCGGTGGTGCTGCTGCTGAGGATGAGGAGGACGAGACATCGTTCCGTGTGTTGGCGGATTCGATTCAGAAGTTTGGGAAGATTTATGAGAAGATTGAGAACAGCAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGCTGGATTTTAACAGGGAGTTGGAGCTGCAGAAGAAGCAGATTCTCGAGAGGGCGCAGGCTGAGATTGCCAAAATTCAGGAAGGGGATGAGGAGGATACCGACACTTCCACGGAGAATCTCAGTGAATGA 1065 0.5305 MDDMEDDARYPPKSFSLNRQNPSHRHKHPVRAAPYHRPMPTRYDQSVVDDDDDDDEENEHEDFNDDNDEGENGYDENDVVGYPRIPKKRKVLVAPGSYEFAPRFKLSYGSRGSGSSGEEWSDHETFVLLEVWGDKFLQLGRNSLRSEEWREVAEKVSEELKTDRSVTQCRSVLDKLKRKYKKEKTKMDEMGMGSCKWAFFKKMDMLMASSARQEYGLACGVDSGEYVFMNTRIYLNRSNGFDEMRDSPGESESDDDDEEEEECGGGGGAAAEDEEDETSFRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQEGDEEDTDTSTENLSE* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1713 354 Coils Coil 294 336 - -
Pvu4g1713 354 MobiDBLite consensus disorder prediction 248 273 - -
Pvu4g1713 354 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 42 349 IPR044823 -
Pvu4g1713 354 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 42 349 - -
Pvu4g1713 354 MobiDBLite consensus disorder prediction 239 278 - -
Pvu4g1713 354 MobiDBLite consensus disorder prediction 335 354 - -
Pvu4g1713 354 MobiDBLite consensus disorder prediction 1 81 - -
Pvu4g1713 354 MobiDBLite consensus disorder prediction 47 75 - -
Pvu4g1713 354 Pfam Myb/SANT-like DNA-binding domain 119 205 IPR044822 -
Pvu4g1713 354 Gene3D - 120 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1713 Pvu-Chr4 44403703 44407252 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1713 120 343 Trihelix Transcription Factor Family AT1G54060 31.636 1.06e-19 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu4g1713 Myb_DNA-bind_4 1.7e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1713 - - gmx:100790166 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1713 4 44403703 44407252 Pvu4g1713 4 44403703 44407252 ECH