Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1709 ATGAGGAAGAAAACCTATTCCTTCCATTTCTCACTTTCACTCTCACTCTCGCTCTTCTTCGTTGTGCTTGCGAACTCTCTGTGTTCTTCTGCAGCAATCTCCCACAATGGGCCTCTCACCGACGCCGAAGCCTCCTACATCAAACAGCGTCAGCTTCTGTACTACAAGGACGAGTTCGGTGACAGGGGAGAAAAAGTGACCGTAGATCCCTCTTTTCGCTTCGAGAACAACCGGTTGAGAAACGCGTATATAGCGTTACAAGCATGGAAGCATGCCATTCTCTCTGATCCCAAAAACCTCACGCTCGACTGGGTGGGGCCCAATGTGTGCAACTACACCTCCGTTTTCTGTGCTCCGGCGCTTGACAACCCTAAGATCAACACCGTTGCCGGAATCGATCTCAACCACGGCGACATTGCCGGGTACCTCCCCGAGGAGCTTGGTTTGCTCACCGACCTCGCGCTCCTCCACATCAACACCAACCGCTTCTGCGGCACCGTGCCGCACAAGTTCGACAAGCTCAAGCTCCTCTTCGAGCTGGATCTCAGCAACAATCGGTTCGCCGGGAAGTTCCCTGACGTGGTGCTGCGACTGCCGCAGCTCAAGTTCCTAGATCTGAGGTTCAACGAATTCGAAGGCACGGTCCCCAAGGAGCTTTTTGATAAGGAGCTGGATGCCATTTTCATCAACGACAACCGCTTTGTGTTTGACCTGCCGGAGAACTTTGGCAACTCCCCCGTGTCGGTTATCGTGCTGGCCAACAACCGCTTCCACGGCTGCGTGCCGGCTGGAATCGGCAACATGAAGGGGCTGAACGAGATTATTCTGATGAACAACGCGTTCAGGTCGTGCTTCCCTGAGGAGATAGGGTTGCTGACAAACTTGACGGTGTTCGATGTGAGCTTCAACCAGTTGTTAGGGCCTTTGCCTGAGGCCATCGGAGGGGCCGTGGGTTTGGAGCAGCTCAATGTGGCGCATAATTTACTCTCCGGGAAGATTCCCGAGAGCATTTGTAAGCTTCCCAATCTTCAGAACTTTACTTTCTCTTACAACTTTTTCACGGGCGAGCCGCCTCGGTGTAGAGCTTTGCCGGCTGCTGATGACCGCCGCAACTGCCTTCCGGCCAGGCCGTACCAGCGCTCCGCCGGACAATGTAAGTCGTTTTTGTCGCACCCTGTCGATTGCAAGTCTTTTAGGTGTAAGTCTTTTGTTCCTACTTTGCCACCTCCTCCTCCTCCGTCACCGCCATTGCCGTCACCGCCACCGCCGTCACCTGTTTATGTCCCTCGTACCCCTCCGCCACCACCGCCGGTATACTCGCCACCGCCTCCGCCACCAGTGTACTCGCCACCGCCACCACCTCCAGTGTATTCGCCTCCACCGCCGCCACCGCCACCTCCACCACCTCCACCGGTCTATTCTCCTCCTCCACCACCACCTTCACCACCCCCGCCTTCACCGCCACCTCCAGTCTATTCTCCACCCCCACCCCCACCTTCACCCCCGCCACCGTCGCCACCTCCGCCATCCCCACCACCGCCAGTCTATTCACCACCGCCACCTTCACCGCCACCACCCGCACCAGTTTATTGTGTGAAGTCTCCGCCACCACCTTCACCGCCTCCACCATCACCCCCACCTCCACCAAGTCCTGTATTCTCCCCACCACCACCTGTGCAATATTACTATAGTCCACCACCGCCACCACAACACTCACCTCCACCGCCACCACCACACTCACCACCGCCGCCACCACCCTCACCGTCGCCGCCAGTTTATCCCTATCTGTCACCGCCCCCACCGCCTCCTGTTCACTCTCCACCTCCGCCGGTCCATTCACCACCACCACCATCTCCTCCACCTTGTATAGAACCACCACCACCGCCTCCACCCTGTATAGAACCGCCGCCGCCTCCACCATCACCACCGCCTTGTGAAGAGCATTCGCCGCCGCCGCCATCACCCCATCCTGCACCTTACCTGCCACCGCCATCACCATCACCACCACCTCCCCCAGTTCAATACAATTCTCCTCCACCACCAACACCTGTTTATGAATACAATTCACCGCCGCCCCCACCTCCGTCGTCTCCGCCACCAGCCCCCGTTTATGAAGGGCCTTTGCCACCTGTCATTGGAGTCTCATATGCATCTCCTCCTCCACCTCCCTTTTATTGA 2178 0.5744 MRKKTYSFHFSLSLSLSLFFVVLANSLCSSAAISHNGPLTDAEASYIKQRQLLYYKDEFGDRGEKVTVDPSFRFENNRLRNAYIALQAWKHAILSDPKNLTLDWVGPNVCNYTSVFCAPALDNPKINTVAGIDLNHGDIAGYLPEELGLLTDLALLHINTNRFCGTVPHKFDKLKLLFELDLSNNRFAGKFPDVVLRLPQLKFLDLRFNEFEGTVPKELFDKELDAIFINDNRFVFDLPENFGNSPVSVIVLANNRFHGCVPAGIGNMKGLNEIILMNNAFRSCFPEEIGLLTNLTVFDVSFNQLLGPLPEAIGGAVGLEQLNVAHNLLSGKIPESICKLPNLQNFTFSYNFFTGEPPRCRALPAADDRRNCLPARPYQRSAGQCKSFLSHPVDCKSFRCKSFVPTLPPPPPPSPPLPSPPPPSPVYVPRTPPPPPPVYSPPPPPPVYSPPPPPPVYSPPPPPPPPPPPPPVYSPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPSPPPPAPVYCVKSPPPPSPPPPSPPPPPSPVFSPPPPVQYYYSPPPPPQHSPPPPPPHSPPPPPPSPSPPVYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPCIEPPPPPPSPPPCEEHSPPPPSPHPAPYLPPPSPSPPPPPVQYNSPPPPTPVYEYNSPPPPPPSSPPPAPVYEGPLPPVIGVSYASPPPPPFY* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1709 725 MobiDBLite consensus disorder prediction 633 725 - -
Pvu4g1709 725 Gene3D Ribonuclease Inhibitor 82 369 IPR032675 -
Pvu4g1709 725 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 480 - -
Pvu4g1709 725 SUPERFAMILY L domain-like 83 364 - -
Pvu4g1709 725 MobiDBLite consensus disorder prediction 450 621 - -
Pvu4g1709 725 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 480 - -
Pvu4g1709 725 PRINTS Proline rich extensin signature 404 425 - -
Pvu4g1709 725 PRINTS Proline rich extensin signature 430 446 - -
Pvu4g1709 725 PRINTS Proline rich extensin signature 451 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1709 Pvu-Chr4 44347108 44351234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1709 30 499 Leucine-rich Repeat extension Gene Families AT3G24480 67.579 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1709 - - gmx:106799218 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1709 4 44347108 44351234 Pvu4g1709 4 44347108 44351234 ECH