Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1689 ATGGACTTTGTGGAGGTTTTGCTCTCACTCATGCACCAACCAAATGATGTTCACAACAACCAAAACGTTATTGATAGGACAAACATCAAAGCTATCATATTAGACATGATCGGTGGAGCATTAGAAACATCTTCCACAACATTAGAATGGGCCATGTCAGAACTCTTGAGGCACCCAAGTGTGATGAAGAGACTTCAACACGAGCTAAAACATGTGGTTGGAATGAACAAATACGGGGAGGAAAGTGACTTAGACAAGTTATCTTTTTTGAATATGGTGGTGAAGGAAACACTAAGGTTGCACCCGGTTGTACCTTTGGTAGTACCTCGTGAGTGCAAAGAAGATGTTATCATTGATGGTTATTTTATAAAGAAAAAATCAAGGATTATAGTAAATGCATGGGCTATAGGGCGAGATCCTAATGTTTGGGACAATGCCGAGATTTTCGATCCTACAAGGTTTGAGAATAACAATGTAGACATTCGTGGAAAGGACTTTCGAATTTTACCATTTGGGTCGAGTCGAAGAGGGTGCCCCGGGATTCATTTGGGTTTAACAACGGTTAGTCTTGTTTTGGCACAATTGGTGCATTGTTTTGATTGGATGCTTCCATTGGGCATGTCTTGTGATGAGTTAGACATGCAAGAGATATTTGGACTCAGCATACCCAGAAAGAATAATTTGTTAACTAGACCAGTTTATCGACTAGGTAGTTAG 717 0.4017 MDFVEVLLSLMHQPNDVHNNQNVIDRTNIKAIILDMIGGALETSSTTLEWAMSELLRHPSVMKRLQHELKHVVGMNKYGEESDLDKLSFLNMVVKETLRLHPVVPLVVPRECKEDVIIDGYFIKKKSRIIVNAWAIGRDPNVWDNAEIFDPTRFENNNVDIRGKDFRILPFGSSRRGCPGIHLGLTTVSLVLAQLVHCFDWMLPLGMSCDELDMQEIFGLSIPRKNNLLTRPVYRLGS* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1689 238 Pfam Cytochrome P450 1 228 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 2 232 - -
Pvu4g1689 238 PRINTS P450 superfamily signature 39 56 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PRINTS P450 superfamily signature 92 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PRINTS P450 superfamily signature 169 178 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PRINTS P450 superfamily signature 178 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 232 - -
Pvu4g1689 238 Gene3D Cytochrome P450 1 233 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PRINTS E-class P450 group I signature 28 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PRINTS E-class P450 group I signature 48 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PRINTS E-class P450 group I signature 91 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PRINTS E-class P450 group I signature 132 156 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PRINTS E-class P450 group I signature 168 178 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 PRINTS E-class P450 group I signature 178 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g1689 238 SUPERFAMILY Cytochrome P450 2 235 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1689 Pvu-Chr4 44141694 44142410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1689 10 236 Monolignol Biosynthesis Gene Families AT4G36220 47.807 7.14e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1689 - - var:108345921 394.815