Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1663 ATGGTACTACAAATTACACAGATACAGATGAAGGTGCGTGTGTGTGTGAACAGCAGAAGGTTGGGCAGGGAGACACGGAAACAAAAGGAAAAAGTGGTGTGCGTGTTGTTCATGAGATGTCGTTTGTTCCAAATCCAATGTAGTCTCCGCGTTTATAGGAGTGGGTCCCACTCACATCCAAAACCTTTGGCAGCGCCCACAGTCCCACATCGAAACCTTGATTTCATGAACTCATTGGTAGTTAAGGAAATTTGCCCTGAGTCTCAGTCCAACGCCACCCTCTTTCTCGCCAAGTTCTATGGCCGTCAAGGCCTCCTCAACCTCCTCTCCGACGCTCCCTCACATCTCCAACCAGCCGTATTCAAATATTTGCTTTACGAAGCTTGCGGTCGGATGGTGGACCCGGTTTTCGGCTCGACCGGGTTACTCTCGACCGGAAATTGGCACCTCTGTGAAGCGGCTGCCACAGCTGTTCTTAGCGGCGCGCCGATTCAGCAAGCTCTTCTAGATATTCGCCACGTGGCAAAGAGTCATAAATCGTGCGGTCCTGATTCTCTCCACAGGGTAAAGTCACAAACCAGCAAGTTCAAGCGCCGCCCTGCGAAGCCAAAAGTGGACTCAACCGTGGCTGAGTTGGCTGAAAGCGAGTTAGATGGACAGGGTTCGCTGAGTCATGACTCGGTGTCAGGGTTGACTCGGACGAGTGAGAACAAAATCGTTGGTGGGGAAGCCGATAGCAGCTGCAGCGAGAACGTGGTGGAGCCGGCTGCAACCAATGATGGAGAAATTGAGCTTCAGTTGACTTTGGGATGGGGTCCGGTGAAGAAATCAACGACCGTGATGTTGCCACGTGTAGGGATCAATCTCTCTGGCAACACGTGA 882 0.5193 MVLQITQIQMKVRVCVNSRRLGRETRKQKEKVVCVLFMRCRLFQIQCSLRVYRSGSHSHPKPLAAPTVPHRNLDFMNSLVVKEICPESQSNATLFLAKFYGRQGLLNLLSDAPSHLQPAVFKYLLYEACGRMVDPVFGSTGLLSTGNWHLCEAAATAVLSGAPIQQALLDIRHVAKSHKSCGPDSLHRVKSQTSKFKRRPAKPKVDSTVAELAESELDGQGSLSHDSVSGLTRTSENKIVGGEADSSCSENVVEPAATNDGEIELQLTLGWGPVKKSTTVMLPRVGINLSGNT* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1663 293 Pfam Lateral organ boundaries (LOB) domain 81 157 IPR004883 -
Pvu4g1663 293 MobiDBLite consensus disorder prediction 181 205 - -
Pvu4g1663 293 ProSiteProfiles LOB domain profile. 63 164 IPR004883 -
Pvu4g1663 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 86 277 - -
Pvu4g1663 293 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 86 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1663 Pvu-Chr4 43937823 43939653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1663 86 281 AS2 family AT3G02550 41.176 4.42e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu4g1663 LOB 3.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1663 - - pvu:PHAVU_004G157100g 585.874