Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1662 ATGAATCCACCATCAAATAACCACAATATAGAACCCAGAGTCCTGGGTAATTCAAGTTCAAATATCAATGGAGTTAACTCACCCCAGAGGAAGGTCTTGTTAGAAACAAAGTTGCAACGTGCTCTACACAGTCCACTTATGGCAGAGCCATCAACAACATTAATAACCCAAGTAGGTCATAAATTTCCTGAGGTGTTTCGACTAAAACAAGGAAGCTATGCAGATCTTCCTTCAACCAAAATTTCAGAATTAATGAAATCAACTAGCTTGGATCATTTATTGTTGCAGAACGCTCCTACTCAATCACTCCTGAGTGTAGTGAATGGTATTTTAGAAGAAAGTGTTGAAAGAAGAAATGGCGAAATACCCCATCGTGTGGCTTGCTTATTGAGAAAGGTTGTCCAAGAGATTGAGCGACGTATATCAACTCAAGCAGAACACTTGAAAACTCAAAACAATATTTTCAAGGCTCGTGAAGAAAAATATCACTCACGAATTAGAGTTCTTGAGGCTCTTGCATCTGGAACTGAGGAAGAGAACGAGATCGAGAGGGTGAAAAAAGAGGAGAAGAAGGTAGATGGATTAAAACAAACTAGGATGAATAAAATGGAAGAAGAAAAGGAAAATGATATGAAGCTAGTTGAGAACACTAAAAGGGAAGAAAAGAGGGAATGCGACAAAGAGGTTATTAGATATATCAAAGAGTTAAAGGATAAAACTGTGGAAATTTCAACATTGAAGCAAAAGCTAGAAACAATGAAAAAAACATATGAAGTACAATGTTCACAGATGGAACAAAAAGCTAAGGAGGAAAATACAACAGATGACAAAGAGGTTATTAGATATATTAACGAGTTAGAGGATAAAACTAAGGAAATTTTAGCATTAAAGCAAAAACTAGAAACTATGGAAAAAACGTGTGAAGAGCGGTGCTTAAAATTAGAAGCAAAAGCTAAAGAAGAAAAGATGACAGATGACAAAGATGAAATTAAAGTGCTAGAGAACAAAAGTAATGAAATTTCAACGTTGAAGCAAAAAATAGAAAAGCTAGAAACATTGATAAAATCTTATGAAGTACAATGTTCAGAATTGAAAGCAAAAGTTGAGGAGAAAAATATGATAGATGGAAAAGATGTTAGTAGATATATTAAAGAATTGGAGGACAAAAATATGGAAATTTCAACATTAAACAAAAATCTAGAGAACATGAAAAAATCATATGAAGTAGAATACTCACAGTTGAAAGCAAAAGTTGAGGAGGAAAAGGGAGCAGATGAACTGAAAGCAAAAGCTGAGGAGGAAAAGGTAGCAGATGGAAAAGAGGCTATTAGATATATTAAAGAGTTGGAAGACAAAAATAAGGAAATTTCAGCACTTAAGCAAGAATTGGAAACAATGAAAAAAACTTATGAAGTTCAATGCTCACAGTTGAAAGCAAAAATTGAAGAGGAAAAAATTGCAGATGGGAATGAGAGTATTAGACATATTAAAGAGCTAGAGGAAAAAAATATGGAAATTTCAGCATTTAAACAAGAACTAGAAACAATGAAAAAAGCACATGAAGTTCAATGCTCACAATTGAAAGCAAACGCTGAAGAGGAAAAAGTGGTGGGTGGGAAAGAAATTATTAAATATACCAAAGAGCTAGAGGACAAAAATATGGAAATTTCAGCATTTAAGCAAGAACTAGAAACAATGAAAGAAAAATATGAAGTACAATGCTCACAATTGAAAGAAAAAGCTGATGAGGAAAAAATGGTGAATGAGAAAGAAATTATGAAATATACAAAAGAGCTAGAAGACAAAATTATGGAAATTTCATCATTTAAGCAAGAACTAGAAACAATGAAAAAAACACATGAAGTACAATGCTCACAATGGGAAGCAAAAGTGGAGGATGGTAAAGAAGAACTAAAACAAAAATCACAAGAATATGAAAATTTGTTGGAAAAACTAAGAAATAAGGTTAAAGAGAATGAAACCCTTTACGAATCAAAATATCAGAAGTGGTTCCAGAAAGAGAAGCAAATACGAAAAGATGTGAATTTTCAGTTCAGTTTCATACAGAAATTGAAATTATCATGGGAATCTATTAAGCAAGATGCTTTGAAAGACCAAATGATCTATTCTGAGGAATGTAAAAAACTTGGTGTAAATCTTAAATCACTAGTAGAAGCAGCTGAGAATTATCAAATAGTTCTTGCAGAAAATCGAAAACTATTCAATGAAGTTCAAGAATTAAAAGGAAATATAAGAGTGTATTGTCGACTTAGACCATTTCTTCCTGGTCAAAAGGAAAAACAATCTATTGTGGAACATGTTGGTGAAAATGATTTGGTTGTGGCAAATCCTGCCAAACAAGGAAAGGAGGCCCTTAGAACATTTAAGTTCAATAAGGTCTTTGGTCCAACATCAACTCAAGCTGGGGTGTATGCTGACATACAAGCCTTTATTCGATCAGTATTGGATGGGTTTAATGTATGTATATTTGCTTATGGTCAAACTGGTTCAGGCAAAACTTACACAATGAGTGGTCCAAATAATGCATCAATTGAGGATCTTGGTGTTAACTATCGAGCTCTGAATGATCTCTTCAGCATATCTACAAATAGAAAAAGCTCCATAGTGTATGAAATTGGGGTTCAAGTCATTGAGATATACAATGAACAAGTTCGAGACTTATTAACACATGTCATGTTTCTGAACGATGATTTCCTTGATTTACACACACTTGGGATATTGAATCACGCTCAACCAAATGGATTAGCAGTACCAGATGCTACCATGCAACCTGTGAAGACAACTGAAGATGTGATAAAGCTAATGGACATTGGTTTAAAAAATAGAGCAAAGGGTTCGACAGCTATGAATGAAAGAAGTAGTCGTTCTCACAGTGTGGTCTCAATTCATGTTCGTGGGACGGATAAAAAGTCTGGTTCCTCTCTTCATGGTAATCTTCATTTGGTAGATTTAGCAGGAAGTGAAAGAATAGATCGCTCTGAAGTAACTGGGGATAGACTCAAGGAAGCACAACATATTAACAAATCACTATCTGCTCTTGGAGATGTCATTTTTGCACTTTCTCAAAAGAGTTCACATGTGCCATATAGAAATAGCAAGCTCACTCAACTTCTACAAACATCTCTTGGTGGTCAAGCAAAAACACTGATGTTAGTCCAAATTAATTCTGATGTAAAGTCTTTTTCTGAATCTTTGAGTACTTTAAAGTTTGCTGAAAGAGTTTCTGGAGTTGAGTTAGGAGCGGCTAAAAGTACTAAAGAAGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTTTGAAGGACACAATTTTGGTTAAAGATACTGAGATTGAGAAGTTACAATTACTTACAGATCTAAAAAATGTATATCCTAGTGTTAATTCTGAGAACAGTGAAACTACCTAA 3432 0.3427 MNPPSNNHNIEPRVLGNSSSNINGVNSPQRKVLLETKLQRALHSPLMAEPSTTLITQVGHKFPEVFRLKQGSYADLPSTKISELMKSTSLDHLLLQNAPTQSLLSVVNGILEESVERRNGEIPHRVACLLRKVVQEIERRISTQAEHLKTQNNIFKAREEKYHSRIRVLEALASGTEEENEIERVKKEEKKVDGLKQTRMNKMEEEKENDMKLVENTKREEKRECDKEVIRYIKELKDKTVEISTLKQKLETMKKTYEVQCSQMEQKAKEENTTDDKEVIRYINELEDKTKEILALKQKLETMEKTCEERCLKLEAKAKEEKMTDDKDEIKVLENKSNEISTLKQKIEKLETLIKSYEVQCSELKAKVEEKNMIDGKDVSRYIKELEDKNMEISTLNKNLENMKKSYEVEYSQLKAKVEEEKGADELKAKAEEEKVADGKEAIRYIKELEDKNKEISALKQELETMKKTYEVQCSQLKAKIEEEKIADGNESIRHIKELEEKNMEISAFKQELETMKKAHEVQCSQLKANAEEEKVVGGKEIIKYTKELEDKNMEISAFKQELETMKEKYEVQCSQLKEKADEEKMVNEKEIMKYTKELEDKIMEISSFKQELETMKKTHEVQCSQWEAKVEDGKEELKQKSQEYENLLEKLRNKVKENETLYESKYQKWFQKEKQIRKDVNFQFSFIQKLKLSWESIKQDALKDQMIYSEECKKLGVNLKSLVEAAENYQIVLAENRKLFNEVQELKGNIRVYCRLRPFLPGQKEKQSIVEHVGENDLVVANPAKQGKEALRTFKFNKVFGPTSTQAGVYADIQAFIRSVLDGFNVCIFAYGQTGSGKTYTMSGPNNASIEDLGVNYRALNDLFSISTNRKSSIVYEIGVQVIEIYNEQVRDLLTHVMFLNDDFLDLHTLGILNHAQPNGLAVPDATMQPVKTTEDVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGTDKKSGSSLHGNLHLVDLAGSERIDRSEVTGDRLKEAQHINKSLSALGDVIFALSQKSSHVPYRNSKLTQLLQTSLGGQAKTLMLVQINSDVKSFSESLSTLKFAERVSGVELGAAKSTKEGRDVRELMEQVASLKDTILVKDTEIEKLQLLTDLKNVYPSVNSENSETT* 1144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1662 1143 PRINTS Kinesin heavy chain signature 824 845 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1662 1143 PRINTS Kinesin heavy chain signature 954 971 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1662 1143 PRINTS Kinesin heavy chain signature 985 1003 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1662 1143 PRINTS Kinesin heavy chain signature 1034 1055 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1662 1143 PANTHER KINESIN-LIKE PROTEIN KLP-3 600 1126 - -
Pvu4g1662 1143 PANTHER KINESIN-LIKE PROTEIN KLP-3 28 198 - -
Pvu4g1662 1143 Coils Coil 542 669 - -
Pvu4g1662 1143 Pfam Kinesin motor domain 756 1082 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1662 1143 Gene3D Kinesin motor domain 693 1086 IPR036961 -
Pvu4g1662 1143 Coils Coil 379 424 - -
Pvu4g1662 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 750 1122 IPR027417 -
Pvu4g1662 1143 Coils Coil 236 274 - -
Pvu4g1662 1143 Coils Coil 442 487 - -
Pvu4g1662 1143 ProSiteProfiles Kinesin motor domain profile. 750 1084 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1662 1143 SMART kinesin_4 748 1092 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu4g1662 1143 Coils Coil 496 530 - -
Pvu4g1662 1143 MobiDBLite consensus disorder prediction 1 26 - -
Pvu4g1662 1143 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 28 198 - -
Pvu4g1662 1143 PANTHER KINESIN MOTOR CATALYTIC DOMAIN PROTEIN 600 1126 - -
Pvu4g1662 1143 Coils Coil 178 224 - -
Pvu4g1662 1143 Coils Coil 279 374 - -
Pvu4g1662 1143 Gene3D - 327 365 - -
Pvu4g1662 1143 Gene3D - 272 315 - -
Pvu4g1662 1143 Gene3D - 588 628 - -
Pvu4g1662 1143 Gene3D - 438 479 - -
Pvu4g1662 1143 Gene3D - 224 265 - -
Pvu4g1662 1143 Gene3D - 375 416 - -
Pvu4g1662 1143 Gene3D - 538 578 - -
Pvu4g1662 1143 Gene3D - 489 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1662 Pvu-Chr4 43925668 43932313 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1662 738 1084 Calmodulin-binding Proteins AT5G65930 37.037 5.88e-62 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1662 K10406 - gmx:100779403 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3254 2 47684488 47691022 Pvu4g1662 4 43925668 43932313 PCT