Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1647 ATGAGAAGAACTACGATAATGAATGAGATCCACACCACACTCACCCTCTCTTTCTTCCTCTTCATCGCTTTCCCATACTCCCACTCTCAATCACCGCCACCGCCACCGCCTTGTGCTCCACAGTCATACATGTGCAGCATAAACGTTTCCGCCACCGCCATCCTGGATCCTTTCTGGGAACAGAGTCCAGCGTCTCAATGTAAAGGCGCCCACCCATCATCCCAGCTCATCTGCTATGATCCTTATAAATATGATCGTTATGAACATCAAAATTTGACGGTGAAGGATATCGACCACACCACTCACACCATGACACTGGTACCAACAGACACTGTCAAAGATGTTTGTTCTCCTGAATTTTTGAAGAATTACGAGAACTTGAACAGCACTCTGTTACAGTATTACGCTTCAGTGCACAACGTCACCGTATTCTTCCATGGTTGTCCTCTTGACATCCCGAAATTCCCTTCAAAACGCAAATGGACGTGCGGGGAGGATGGTGTGTATTATTTTGAGGAGGCATACAAGGAGGATGAGATGCTCGAGAAATACCCACTGCTTAAGCAGTGCAAGAGAAGTTTGAGGTTGCCCAGTGCGGCTCCTCTGAATCATTATGATGATAGTGATGATGGAGCTGGAGTTCTGCAACAAGCTTTGAATGATGGGTTTGAGGTCTACTATGATGTTCCTCAACATTGCACAAGATGCAACGAAAGTAACTGCGGGATGGATGGTTACGATGGACATGTAGTTTCATGCGAATACTATTGCCCAGATCAACACTGTTCTCCCAAAAGAAGCATATTGGAAAACAGGAAGAAGCTCATTATTTTAGGTGTTCTAGGTTCAGCAATTGCAGGAGTCTTAATATTAATTTCAATTTTATGTGCAAGATACAAGTCATCAACCTGGCTAGCGAGTTTTGGGCTGACTTCAAAATGTAATCAAAATATTGAAGCATTCCTTAAAATTGACGGCTCTCTGGCTCTAAAAAGATATAAATTATCACATTTAAAACAAATGACCAAGAACTTCAAAGAGAAGCTGGGACAAGGTGGTTTTGGTACTGTCTACAAAGGTAAGTTATTCAATGGTAGTCCTATTGCTGTAAAGATGTTGAGTGCATCGAAAGAAAATGGTGAAGAATTTATCAATGAGGTTGCTAGTATTAGTAGAACTTCTCACGTTAATGTGGTCTCGCTTCTTGGATTCTGTTTGGAAGGTCGCAACAGAGCTCTCATCTATGAATTTATGTCCAATGGTTCACTTGACAAATTCATTTATAGAAAAAGTTGTGAAGTAGTTCCACCTTTGAGTTGGGATATTATATATCAAATTGCAAGGGACATAGCTCAAGGGTTAGAATACTTACACAAGGGATGCAATACTCGAATTATTCACTTTGACATAAAACCACATAACATTCTTTTGGATGAGAATTTTTATGCAAAGATATCGGATTTTGGATTGGCAAAACTGTGTCCTAGGAATGAAAGTATTGTTTCCTTGTCAGATGCTAGAGGAACAATGGGGTATGTAGCTCCAGAAATGTGGAGTAGAAATCTTGGAAGAGCTTCACATAAGTCTGATGTTTATAGTTATGGAATGATGCTGTTAGAGATGGTGGGAGGAAGGAAGAACATTAATGCCGAAGCTAGTCGTACAAGTGAGATATACTTCCCGCACTGGGCATACAATAAGCTTGAGTTGGACAATGATTTGGTACCAAATATGGTGATGACAACAGAAGAAAATAAGATTGCAAAGAGGTTGGCCATAGTGGGCTTATGGTGCACTCAAACATTTCCTAATGACAGACCAACAATGAGCAACGTGATAAATATGTTGGAAGACACCGTGGATTCTCTACAAATCCCACCCAAACCTTTGCTTTCTTCTCCCACTAGATCAGTTCCAAAATACTCTATTTCCTGA 1935 0.4093 MRRTTIMNEIHTTLTLSFFLFIAFPYSHSQSPPPPPPCAPQSYMCSINVSATAILDPFWEQSPASQCKGAHPSSQLICYDPYKYDRYEHQNLTVKDIDHTTHTMTLVPTDTVKDVCSPEFLKNYENLNSTLLQYYASVHNVTVFFHGCPLDIPKFPSKRKWTCGEDGVYYFEEAYKEDEMLEKYPLLKQCKRSLRLPSAAPLNHYDDSDDGAGVLQQALNDGFEVYYDVPQHCTRCNESNCGMDGYDGHVVSCEYYCPDQHCSPKRSILENRKKLIILGVLGSAIAGVLILISILCARYKSSTWLASFGLTSKCNQNIEAFLKIDGSLALKRYKLSHLKQMTKNFKEKLGQGGFGTVYKGKLFNGSPIAVKMLSASKENGEEFINEVASISRTSHVNVVSLLGFCLEGRNRALIYEFMSNGSLDKFIYRKSCEVVPPLSWDIIYQIARDIAQGLEYLHKGCNTRIIHFDIKPHNILLDENFYAKISDFGLAKLCPRNESIVSLSDARGTMGYVAPEMWSRNLGRASHKSDVYSYGMMLLEMVGGRKNINAEASRTSEIYFPHWAYNKLELDNDLVPNMVMTTEENKIAKRLAIVGLWCTQTFPNDRPTMSNVINMLEDTVDSLQIPPKPLLSSPTRSVPKYSIS* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1647 644 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Pvu4g1647 644 Gene3D Phosphorylase Kinase; domain 1 310 417 - -
Pvu4g1647 644 ProSiteProfiles Protein kinase domain profile. 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1647 644 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Pvu4g1647 644 PANTHER RUST RESISTANCE KINASE LR10-RELATED 90 643 IPR045874 GO:0004672
Pvu4g1647 644 Pfam Protein tyrosine and serine/threonine kinase 345 616 IPR001245 GO:0004672|GO:0006468
Pvu4g1647 644 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 90 643 - -
Pvu4g1647 644 SUPERFAMILY Protein kinase-like (PK-like) 327 617 IPR011009 -
Pvu4g1647 644 Pfam Wall-associated receptor kinase C-terminal 177 259 IPR032872 -
Pvu4g1647 644 CDD STKc_IRAK 349 617 - -
Pvu4g1647 644 SMART serkin_6 343 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1647 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1647 Pvu-Chr4 43761745 43766476 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1647 38 642 Receptor kinase-like Gene Family AT1G66910 37.619 2.74e-126 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu4g1647 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1647 - - gsj:114419144 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3274 2 47836194 47839193 Pvu4g1647 4 43761745 43766476 PCT
Pvu4g1647 4 43761745 43766476 Pvu2g3275 2 47839341 47843067 PCT