Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1645 GTAAAGCACTTATGGACAAAAAATAAAGCACTGGATAAAGGCAATCATGGGGGCCACCTTAAACTGAATAATCTCTTCATGGGGTGCGAGGATATAAAAAAGTGCAGTAGTATGACACAGTCACCGGGAAGTGATGAATTTGCTAAGGACACACCTGAGAATGATGTTCATCGTGTGTTATCTGCCAACTTTAGGAATGAAACAAGTGGCATAGGTTTTCAATATCCTCCTCCTGACTCACCTTACGAATCAATCAGAAATGAAACAAACTCCTCACTAGGAGCAAATTCATCGGCAAGTCCAGCACCAGCACCAGCACCAGCACCAGCACCAGTTCCATTGCCTGCTCCTTCATTATCGATATCGCCATTATCAATACCAACAGAAAGAACCACATTAGGAAAACACCTATTTTGGAAAAGCAAAGTCATTATAGGCATTACAAGTGTTGGTGTGGTAATGGGAGTATTCACTATATGTATTATAATTTATTGTTTTAGATACAAGTTATTCACTCCATCGATGAAATTTGGTTTGACCACAAAGAATGACCAAGATATTGAAGCATTTTTAAAAATTCATGGAGCTGAGTCACAAAAAAGATACAAATTTGCAGAAGTCAAGAAAATGACCAATTTCCTCAAAGTTAAACTTGGTCAAGGTGGTTTTGGTGAAGTGTACAAAGGACAATTACCCTCAGGCATCCCTGTGGCTGTAAAATTATTGAATGCATCCAAAAGAAATGGAGAAGAATTTATCAATGAGGTTGCTAGCATTAGTAGAACCTCTCATGTTAATATTGTGTCACTTCTTGGATTTTGCTTTGAAGGTCGCAAGAAAGCTCTTATCTATGAGTTTATGGCTAATGGTTCTCTTGAAAAGTATATATATAAAAGAGAGGCAGAAAACATTATATCATTGAGTTGGGAGAATTTATACCAAATCTCAATAGGAACAGCTCGAGGGTTGGAGTACTTACATAAGGGATGCAACACTTGA 999 0.3784 VKHLWTKNKALDKGNHGGHLKLNNLFMGCEDIKKCSSMTQSPGSDEFAKDTPENDVHRVLSANFRNETSGIGFQYPPPDSPYESIRNETNSSLGANSSASPAPAPAPAPAPVPLPAPSLSISPLSIPTERTTLGKHLFWKSKVIIGITSVGVVMGVFTICIIIYCFRYKLFTPSMKFGLTTKNDQDIEAFLKIHGAESQKRYKFAEVKKMTNFLKVKLGQGGFGEVYKGQLPSGIPVAVKLLNASKRNGEEFINEVASISRTSHVNIVSLLGFCFEGRKKALIYEFMANGSLEKYIYKREAENIISLSWENLYQISIGTARGLEYLHKGCNT* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1645 332 Gene3D Transferase(Phosphotransferase) domain 1 190 332 - -
Pvu4g1645 332 ProSiteProfiles Protein kinase domain profile. 212 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1645 332 SMART tyrkin_6 212 332 IPR020635 GO:0004713|GO:0006468
Pvu4g1645 332 Pfam Protein tyrosine and serine/threonine kinase 215 328 IPR001245 GO:0004672|GO:0006468
Pvu4g1645 332 MobiDBLite consensus disorder prediction 68 111 - -
Pvu4g1645 332 MobiDBLite consensus disorder prediction 83 99 - -
Pvu4g1645 332 ProSitePatterns Protein kinases ATP-binding region signature. 218 240 IPR017441 GO:0005524
Pvu4g1645 332 SUPERFAMILY Protein kinase-like (PK-like) 216 330 IPR011009 -
Pvu4g1645 332 PANTHER RUST RESISTANCE KINASE LR10-RELATED 139 332 IPR045874 GO:0004672
Pvu4g1645 332 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 139 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1645 Pvu-Chr4 43736633 43742301 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1645 59 332 Receptor kinase-like Gene Family AT5G38280 42.238 5.52e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu4g1645 PK_Tyr_Ser-Thr 3.2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1645 - - pvu:PHAVU_004G1555001 610.527