Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1644 ATGTATGCAGATGAATTGAAACTAAAGATGTTCCGCACTCTCACTCTCTTCTTTCTGTTCTCTGTAACTCCAACACTTGTTCTTCCAACTAAGTGTGATGTGAACTTCAACACTTCGTCTATGCTTCTGGATTGCAGCAGAAGCAGCGTGGATAGTGATCATTCTGCTTACGTGGCACGGAAACTTGATGACGTGTCAGAAAATAAAACTGTTAGCAATATTACCCGAGCTTGCAGTGATGGTGGAAGTTGTATTATCGACGCAACATCACAGTCATCAGCGTCGCCGGTGTCGCCACCAAATTTAAAGGCACCGCCGCCATCATCACGGCCACGTGCACGACGATTCCGATCAATTTCATTATCACCGGCAACAGCACCAGCACCGGCACCTGAATCAATGTTTCGATATCCTGATGGACATTTTGATCGTTCAGGTGTTGTAAGTGCGGTAATTGGAGGATTATTCATCATACTTTGTTGTTTTAGACGCGCTGCAAATGCGGTAATTAAAGGACTTTATTTCATACTTCGTTGTTCTATAAGTGCTGCAAGTGCGGTAATTAAAGGATTTTATTTCATACTTCCTTATTTTACACGTGCTGCAAGTGCGATAATTAAAGGATTTTATTTCATACTTTCTTATTTTATACGTGCTGCAAGTGTGGTAATTAAAGGATTTTATTTCATACTTCCTCGTTTTATAGGTGTTGCAAGTGTGGTAATTAAAGAATTTGGTTTCACACTTTGGTGTTTTATACGTAAGTCATCAAGCAGACTGGTCAAATTTTGTTTTACCACAAACAATGATTCAAATATTGAAGCATTCTTAAGAAATCATGTTGTTATAACACAAAAAAGATACAAATTTTTAGAAGTGAAGAAAATGACTAATTCATTCAAAGTCAAACTTGGTCAAGGTGGTTTTGGTGCAGTATACGAAGGAAAATTACTAACAGGTAGCCTTGTGGCAGTAAAATTACTAAATGAATCCAAAGGAAATGGTGAAGATTTTATCAATGAGGTTGTCAGCATCAGTAGAACATCTCATGTTAATATTGTCACACTTCTTGGATTTTGTTTGGAAGGCCGCAAAAAAGCTCTCATCTATGAGTTTATGGCCAATGGTTCTTTGGATAAGTTTATCTACAAAAGAGGGTCGTCATCAAAAATTACATCTTTGAGCTGGGAGAATTTATATCAAATTTCAATAGGAATAGCTCGAGGGTTGGAGTACTTACACAGGGGTTGCAATACTAAAATTTTACATTTTGACATAAAGCCGCATAATATTCTTTTGGATGAGAATTTGTGTCCTAAAATATCAGATTTTGGACTAGCAAAACTTTGTCTCAGGAATGAAAGCATTATTTCTATGTCAGATGCTAGAGGAACAATGGGATATGTTGCTCCTGAAATGTGGAGTAGAAATTTTGGTGGAGTTTCACAAAAGTCTGATGTCTATAGTTATGGAATGATGCTATTAGAGATGGTAGGAGGAAGGCATAACATTAATGCTGAAGCTAGTCATACAAGTGAGATATACTTTCCACATTTGGCATACAGGAGACTTGAGTCGAATAATGATGTTAGACCGGATGAAATGATGAATACGGAAGAAAATGAGATTGCAAAAAGAATGACTGTAGTGGGGTTATGGTGCATTCAAACACTTCCCAATGATAGACCTACAATGAGTAGAGTGGTCGATATGTTGGAAGGTAACATGAATTCCTTGGAAATGCCTCCAAAACCTTTGTTTTCTTCTCCTACTAGATCAGAAACAGAATCTTCCTTGTAA 1800 0.3744 MYADELKLKMFRTLTLFFLFSVTPTLVLPTKCDVNFNTSSMLLDCSRSSVDSDHSAYVARKLDDVSENKTVSNITRACSDGGSCIIDATSQSSASPVSPPNLKAPPPSSRPRARRFRSISLSPATAPAPAPESMFRYPDGHFDRSGVVSAVIGGLFIILCCFRRAANAVIKGLYFILRCSISAASAVIKGFYFILPYFTRAASAIIKGFYFILSYFIRAASVVIKGFYFILPRFIGVASVVIKEFGFTLWCFIRKSSSRLVKFCFTTNNDSNIEAFLRNHVVITQKRYKFLEVKKMTNSFKVKLGQGGFGAVYEGKLLTGSLVAVKLLNESKGNGEDFINEVVSISRTSHVNIVTLLGFCLEGRKKALIYEFMANGSLDKFIYKRGSSSKITSLSWENLYQISIGIARGLEYLHRGCNTKILHFDIKPHNILLDENLCPKISDFGLAKLCLRNESIISMSDARGTMGYVAPEMWSRNFGGVSQKSDVYSYGMMLLEMVGGRHNINAEASHTSEIYFPHLAYRRLESNNDVRPDEMMNTEENEIAKRMTVVGLWCIQTLPNDRPTMSRVVDMLEGNMNSLEMPPKPLFSSPTRSETESSL* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1644 599 MobiDBLite consensus disorder prediction 579 599 - -
Pvu4g1644 599 ProSiteProfiles Protein kinase domain profile. 298 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1644 599 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Pvu4g1644 599 PANTHER RUST RESISTANCE KINASE LR10-RELATED 235 598 IPR045874 GO:0004672
Pvu4g1644 599 SUPERFAMILY Protein kinase-like (PK-like) 278 573 IPR011009 -
Pvu4g1644 599 MobiDBLite consensus disorder prediction 582 599 - -
Pvu4g1644 599 SMART serkin_6 298 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1644 599 Gene3D Phosphorylase Kinase; domain 1 272 372 - -
Pvu4g1644 599 Gene3D Transferase(Phosphotransferase) domain 1 373 582 - -
Pvu4g1644 599 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 235 598 - -
Pvu4g1644 599 MobiDBLite consensus disorder prediction 90 113 - -
Pvu4g1644 599 Pfam Protein kinase domain 301 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1644 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1644 Pvu-Chr4 43728170 43734811 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1644 269 598 Receptor kinase-like Gene Family AT4G18250 58.580 2.20e-129 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu4g1644 Pkinase 4.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1644 - - pvu:PHAVU_004G155400g 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3275 2 47839341 47843067 Pvu4g1644 4 43728170 43734811 PCT