Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1641 GTTGTAAGTGTGGTAATTGGAGGGTTTCTCTTCATACTATATTGTTTTAGACATAAGTCTTCAATTAGACTGGTCAAATCTTGTTTTACCACAAATAATGATTCAAATATTGAAGCATTCTTAAGAAATCATGGAGCTATAACACAGAAAAGATACAAATTTTCAGAAGTGAAAAAAATGACTAATTCATTCAAAGTCAAACTTGGTCAAGGTGGTTTTGGTGCAGTATATGAAGGAAAATTGCTCACAGGTAGTCGTGTGGCTGTAAAACTACTAAATGCATCCAAAAGAAATGGTGAAGAATTTATCAATGAGGTTGCCAGCATCAGTAAAACATCTCATGTTAATATTGTTACACTTCTTGGATTTTGTTTGGAAGGTCGCAAAAAAGCTCTCATCTATGAGTTTATGGCTAATGGTTCTTTGGATAAGTTTATCTATAAAACAGGACCAACAACAATTGTATCTTTGAGCTGGGAGAATTTATATCAAATTTCAATAGGAATAGCTCGAGGGTTGGTATACTTGCATAGGGGTTGCAATACTAAAATTTTACATTTTGACATCAAGCCGCATAATATTCTTTTAGATGAGAATTTTTGTCCTAAAATATCAGATTTTGGACTAGCAAAGTTGTGTCCTAGGGATGAAAGCATTATTTCCATGTCAGATGCTAGAGGAACAATGGGATATCTTGCTCCAGAAATGTGGAATAAAAATTTTGGAGGAGTTTCACAAAAGTCTGATGTGTATAGTTATGGAATGATGCTACTAGAGATGGTAGGAGGAAGGAAGAACATTAATGTTGAAGCTAGTCGTACAAGTGAGATATACTTTCCACATTTGGCATACAAGAGACTTGAGTCGGATAATGATGTCAGACCGGATGAAGCGATAAATACAGAAGAAAATGAGATTTCAAAGAGGATGACTATAGTGGGGTTTTGGTGCATTCAATCACTTCCCGATGATAGACCTTCAATGAGTAGAGTGGTCGATATGTTGGAAGGTAACATGAATTCTTTGAAAATGCCTCCAAAACCTTTGTTTTCTTCTCCTACTAGATTAGAAACACAATCTTCCTCCTAA 1089 0.3508 VVSVVIGGFLFILYCFRHKSSIRLVKSCFTTNNDSNIEAFLRNHGAITQKRYKFSEVKKMTNSFKVKLGQGGFGAVYEGKLLTGSRVAVKLLNASKRNGEEFINEVASISKTSHVNIVTLLGFCLEGRKKALIYEFMANGSLDKFIYKTGPTTIVSLSWENLYQISIGIARGLVYLHRGCNTKILHFDIKPHNILLDENFCPKISDFGLAKLCPRDESIISMSDARGTMGYLAPEMWNKNFGGVSQKSDVYSYGMMLLEMVGGRKNINVEASRTSEIYFPHLAYKRLESDNDVRPDEAINTEENEISKRMTIVGFWCIQSLPDDRPSMSRVVDMLEGNMNSLKMPPKPLFSSPTRLETQSSS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1641 362 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 356 - -
Pvu4g1641 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Pvu4g1641 362 ProSitePatterns Protein kinases ATP-binding region signature. 68 90 IPR017441 GO:0005524
Pvu4g1641 362 Pfam Protein kinase domain 65 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1641 362 MobiDBLite consensus disorder prediction 342 362 - -
Pvu4g1641 362 SMART serkin_6 62 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1641 362 Gene3D Phosphorylase Kinase; domain 1 25 136 - -
Pvu4g1641 362 ProSiteProfiles Protein kinase domain profile. 62 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1641 362 SUPERFAMILY Protein kinase-like (PK-like) 45 336 IPR011009 -
Pvu4g1641 362 Gene3D Transferase(Phosphotransferase) domain 1 137 345 - -
Pvu4g1641 362 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 356 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1641 Pvu-Chr4 43697645 43698733 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1641 33 350 Receptor kinase-like Gene Family AT4G18250 58.896 1.10e-125 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu4g1641 Pkinase 5.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1641 - - pvu:PHAVU_004G155400g 627.861