Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1639 GTTGTAAGTGTGGTAATTGGAGGGTTTCTCTTCATACTTTACTGTTTTAGACGTAAGTCTTCAAGTAGATTGGTCAAATCTTGTTTTACCACAAACAATGATTTAGATATTGAAGCATTTGTAAACAATATTGGACCTATAACACAAAAAAGATACAAATTTTCAGAAGTGAAAAAAATGACTAATTCATTCAAAGTCAAACTTGGTCAAGGTGGTTTTGGTGCAGTATATGAAGGAAAACTACAAACAGGTAGCCTTGTGGCTGTAAAATTACTGAATGAATCCAAAGGAAATGGTGAAGATTTTATCAATGAGGTTGTCAGCATCAGTAGAACATCTCATGTTAATATTGTCACACTTCTTGGATTTTGTTTGGAAGGTCGCAAAAAAGCTCTCATCTATGAGTTTATGGCGAATGGTTCTTTGGATAGGTTTATCTACAAAAGAGGACCAACAACAATTACATCTTTGAGCAGGGAGAATTTATATCAAATTTCAATAGGAATAGCTCGAGGGTTGGAGTACTTGCACAGGGGCTGCAATACTAAAATTTTGCATTTCGACATCAAGCCACATAATATTCTTTTAGATGAGAATTTTTGTCCCAAAATATCAGATTTTGGACTAGCAAAGTTGTGTCCAAGGAATGAAAGCATTATTTCCATGTCAGATGCTAGGGGAACAATAGGATATCTTGCTCCAGAAATGTGGAGTAGAAATTTTGGTGGAGTTTCGCAAAAGTCTGATGTGTATAGTTATGGAATGATGCTACTAGAGATGGTAGGAGGAAGGGAGAACATTAATGTTGAAGCTAGTCGTACAAGTGAGATATACTTTTCACATTCGGCATACAAGAGACTTGAGTCGAATAATGATGTCAAATCAGATGAAGTGATAAATATAGAAGAAAATGAGATTTCAAAGAGGATGACTATAGTGGGGTTATGGTGCATTCAAACACTTTCCAATGATAGACCTACAATGACTAGAGTGATCGACATGTTGGAAGGTAACATGAATTTCTTAGAAATGCCTCCAAAACCTTTGTTTTTTTCTCGTACTAGATCAGAAACGAAATCTTCATCCTAA 1089 0.3535 VVSVVIGGFLFILYCFRRKSSSRLVKSCFTTNNDLDIEAFVNNIGPITQKRYKFSEVKKMTNSFKVKLGQGGFGAVYEGKLQTGSLVAVKLLNESKGNGEDFINEVVSISRTSHVNIVTLLGFCLEGRKKALIYEFMANGSLDRFIYKRGPTTITSLSRENLYQISIGIARGLEYLHRGCNTKILHFDIKPHNILLDENFCPKISDFGLAKLCPRNESIISMSDARGTIGYLAPEMWSRNFGGVSQKSDVYSYGMMLLEMVGGRENINVEASRTSEIYFSHSAYKRLESNNDVKSDEVINIEENEISKRMTIVGLWCIQTLSNDRPTMTRVIDMLEGNMNFLEMPPKPLFFSRTRSETKSSS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1639 362 Gene3D Transferase(Phosphotransferase) domain 1 137 343 - -
Pvu4g1639 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Pvu4g1639 362 ProSitePatterns Protein kinases ATP-binding region signature. 68 90 IPR017441 GO:0005524
Pvu4g1639 362 Coils Coil 284 304 - -
Pvu4g1639 362 ProSiteProfiles Protein kinase domain profile. 62 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1639 362 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 361 IPR045874 GO:0004672
Pvu4g1639 362 SMART serkin_6 62 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1639 362 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 361 - -
Pvu4g1639 362 SUPERFAMILY Protein kinase-like (PK-like) 45 336 IPR011009 -
Pvu4g1639 362 Pfam Protein kinase domain 65 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1639 362 Gene3D Phosphorylase Kinase; domain 1 39 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1639 Pvu-Chr4 43685683 43686773 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1639 33 350 Receptor kinase-like Gene Family AT4G18250 58.282 6.16e-125 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu4g1639 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1639 - - pvu:PHAVU_004G155400g 620.928