Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1638 ATGTATGCAGATGAACTGAAACTAAACATGTTCCGCACTCTCAATCTCTTCTTTCTGTTCTCTGTAACTGCAACGCTTGTTCTTCCAACTAACTCTGATGTCAACTTCAACACTTCGTCTATGCTTCTGGCTCAAAACCACTCAACCGTAAACAAAGTTGGTGATGTCTTCACGGCGTGTGGTGATAGAAAAAATTGCAGTAGCAGCAGCAGAGTGGATAATGATTCTGCTTACGTGGCGCGAAGACTGGAGACAACTGTTGTTAGTTACCACCAGTCAGCAAACACCACTGCAATTACTAATGCCAGCAATTGCACTGCTAATCGAAGTTGTACCGGCAACTTAACAACGACAACTTCATCATCACCACCGCCTGTGTCAACACCGCTCGCACCGCCACCTGCACGTCGATCACCATCAATTTCATTATCACCAACACCAGCACCAGTAACACCACCAGGTAACCGTGACCACACATGGACAATTATAATTATTATAGGTGTTGTAGGTGTGGTAATTGGAGGGTTTTTCTTCATACTATATTGTTTTAGACGTAAATCTTCAAGTAGACTGGTCAAAATTTGTTTTACCACAAACAATGATTCAGATATTGAAGCATTCTTAAGAAATCATGCGGCTGTAACACAAACAAGATACAAATTTTCAGAAGTGAAAAAAATGACCAACTCATTCAAGGTCAAACTTGGTCAAGGTGGTTTTGGTGTAGTATATGAAGGAAAGTTGCTCACAGGTAGCCGTGTGGCTGTAAAATTACTAAATGCATCCAAAAGAAATGGTGAAGAATTTATCAATGAGGTTGTCAGCATCAGTAGAACATCTCATGTTAATATTGTCACACTTCTTGGATTTTGTTTGGAAGGCCGAAAAAAAGCTCTCATCTACGAGTTTATGGCCAATGGTTCTTTGGATAAATTTATCTACAAAAGAGGGCCATCAACAATTGCATCTTTGAGCTGGGAGAATTTATATCAAATTTCAATAGGAATAGCTCGAGGGTTGGAGTACTTGCATAGAGGTTGCAATACTAAAATTTTACATTTCGACATCAAGCCACATAATATTCTTTTAGATGATAATTTGTGTCCTAAAATATCAGATTTTGGACTAGCAAAGTTGTGTCCCAGGAATGAAAGCATTATTTCCATGTCAGATGCTAGAGGAACAATGGGATATCTTGCTCCAGAGATGTGGAGCAGAAATTTTGGAGGAGTTTCGCAAAAGTCTGATGTGTATAGTTATGGAATGATGCTACTAGAGTTGGTAGGAGGAAGGAAGAATATTAATGTGGAAGCTAGTCGTACAAGTGAGATATACTTTCCACATTTGGCATACAAGAGACTTGAGTCGGATAATGATGTCAGACCGAATGAAATGATAAATATAGAAGGAAATGAAATTGCAAAGAGGATGACAATAGTGGGGTTATGGTGCATTCAAACACTACCGAATGATAGACCTACAATGAGTAGAGTGGTCGAAATGTTGGAAGGTAACATGTATTCTTTGGAAATGCCTCCAAAACCTTTGCTTTCTTCTCCTACTAGATCAGAAACATAA 1578 0.391 MYADELKLNMFRTLNLFFLFSVTATLVLPTNSDVNFNTSSMLLAQNHSTVNKVGDVFTACGDRKNCSSSSRVDNDSAYVARRLETTVVSYHQSANTTAITNASNCTANRSCTGNLTTTTSSSPPPVSTPLAPPPARRSPSISLSPTPAPVTPPGNRDHTWTIIIIIGVVGVVIGGFFFILYCFRRKSSSRLVKICFTTNNDSDIEAFLRNHAAVTQTRYKFSEVKKMTNSFKVKLGQGGFGVVYEGKLLTGSRVAVKLLNASKRNGEEFINEVVSISRTSHVNIVTLLGFCLEGRKKALIYEFMANGSLDKFIYKRGPSTIASLSWENLYQISIGIARGLEYLHRGCNTKILHFDIKPHNILLDDNLCPKISDFGLAKLCPRNESIISMSDARGTMGYLAPEMWSRNFGGVSQKSDVYSYGMMLLELVGGRKNINVEASRTSEIYFPHLAYKRLESDNDVRPNEMINIEGNEIAKRMTIVGLWCIQTLPNDRPTMSRVVEMLEGNMYSLEMPPKPLLSSPTRSET* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1638 525 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 163 523 - -
Pvu4g1638 525 MobiDBLite consensus disorder prediction 114 152 - -
Pvu4g1638 525 PANTHER RUST RESISTANCE KINASE LR10-RELATED 163 523 IPR045874 GO:0004672
Pvu4g1638 525 SUPERFAMILY Protein kinase-like (PK-like) 214 504 IPR011009 -
Pvu4g1638 525 MobiDBLite consensus disorder prediction 125 152 - -
Pvu4g1638 525 ProSiteProfiles Protein kinase domain profile. 229 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1638 525 ProSitePatterns Protein kinases ATP-binding region signature. 235 257 IPR017441 GO:0005524
Pvu4g1638 525 Gene3D Transferase(Phosphotransferase) domain 1 304 511 - -
Pvu4g1638 525 SMART serkin_6 229 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1638 525 Gene3D Phosphorylase Kinase; domain 1 194 303 - -
Pvu4g1638 525 Pfam Protein kinase domain 232 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1638 525 CDD STKc_IRAK 235 504 - -
Pvu4g1638 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 351 363 IPR008271 GO:0004672|GO:0006468
Pvu4g1638 525 PIRSF TyrPK_CSF1-R 229 323 - -
Pvu4g1638 525 PIRSF TyrPK_CSF1-R 479 508 - -
Pvu4g1638 525 PIRSF TyrPK_CSF1-R 13 120 - -
Pvu4g1638 525 PIRSF TyrPK_CSF1-R 315 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1638 Pvu-Chr4 43664055 43673069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1638 200 517 Receptor kinase-like Gene Family AT4G18250 59.509 2.52e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pvu4g1638 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1638 - - var:108343960 687.952