Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1637 ATGCCTCATCCTCCTGTTCCACCTCCTTCTTCCCTCATCAGCACCCTTTTATTCTTCTCACTCTTGCTCCCAACATATGTGTCTAGTGATGCTGAAGGGTACACAGCATGTGAACCTTTTAGCTGTGGGAAATTCAACGATATTAGCTACCCATTTTGGAGTAAGGACCAGCAGGAGTATTGTGGGCATCCAAAGTTCAAGCTTGATTGCCAACAAGACAACGTGACAATTGACATCATGTCACAGACATTCCAAGTCATTGACATGAATCAAACATCTAAGGTTTTGGAGATTGCAAGGTTGGATTTATGGGCTGACCCTTGTACTAATGATTATGTCAATGTGAAGTTGGATCCTGGTTTCTTTAGGTACACTTCTAATGATGATGAGTACACTTTGCTATATGACTGCGGTTCTCTTGGATATACGTCTGGTAGTGTGAATATCGGAGAAGCAATAGCATTTAATTGCCCCGTAGAGGGTGGTCTTCGAGATGCATACTTTGTGTTGAGTACTGAAGTGGTTAATTTATTGAGTCTGGGGTGCAAGAATAGCATCACTGTTTCTGCTCTAAGAGAGGCTGTGAAGGGTGATTCGCTTGTGGGAAATGTTCTGCAAAAAGGATTTGAGGTTGAATGGAGTGGTGTGAATGAAAATCAATGTGATGGTTGCTCAAGATCTGGTGGGAGATGTGGACACAATGCATCTATGGATGCATTTATTTGTCTCTGCCTTAATCATCAACCTGATGATGATTCTTGTAACAAAATCCTAGCAAGGTCTCCAGCAGCAACACCTAGAGTAACACCAGCAAAGTCACAGTTACCCCCTTACTCTCAAATTATTCCAAAACAGTCTCCAGAGTCTCCACATGCTCCGAGCACTCAGAACGTGGGAAGGAAAATCGCTATAGGTGTTGGTTCAGCTGCAGCGGGAGCACTTATAGTGGGCATTTGCGTCTATCTTTTTATTCGTAGAAGGAAGAATAGTTATGTAATGTCATATATACAATCTCGGAGCCTCTCTTCTGATCCATCTTCAAAGGACACTGAGAAGGGAAGTCAAAGCTACACTCAAAGCATTATACCTGGAGTTCACCTCTTCTCCTATGAAGAACTAGAAGTGGCCACGAATTACTTTGACTCAACTAAGGAACTAGGAGAAGGTGGCTTTGGGACAGTGTATTTTGGCAAACTGCGAGATGGGCGTTCTGTTGCAGTGAAGAGGTTGTATGAGAACAACTACAGGATAGTTGCACAGTTCATGAATGAAATTAAAATCCTCACTCGCATAGATCATCCAAATCTTGTGAAGTTATTCGGATGCACCTCTCGCCACAGTCGTGAACTTCTGCTTGTGTATGAGTACATTTCTAATGGAACTGTTGCAGATCATCTTCATGGTCATCTATCTAAACCTGGAACACTCCCTTGGCATATTAGAATGAATATAGCTGTGGAGACTGCAAGTGCACTGAAGTTTCTTCATCTCAAAGGTATCATCCACAGAGATGTTAAAACCAACAACATTCTACTTGAAAGTAACTTCTGTGTGAAAGTGGCAGATTTTGGACTCTCGCGTCTTTTCCCACACCAAGCCACCCATGTTTCAACAGCTCCACAAGGGACTCCAGGTTATGTGGATCCAGAGTACCACGAGTGTTACCAGCTTACCAACAAAAGTGATGTGTATAGCTTTGGAGTGGTGCTGGTTGAGCTGATATCATCACTGCCTGCTGTTGACATCACAAGGCATAGACATGAAATCAATTTGGCCAACATGGCCATTAACAAGATTCACAATCAGACACTGCAAGAGCTTGTGGACCGAAACCTTGGTTTTGAATCAGATTTCAAGGTGAGGAAAATGATAAGTGGTGTGGCTGAGTTAGCATTTCAGTGCTTGCAGAGTTCCAAAGACATGAGACCTTCTATGGAAGAAGTGGTGGAGACTCTCAAGGATATTCAGAGTGATGGCAAAAACAGAAGTCAGCCTGAGGTAATGGATATCTCAAGCACTTCTGATGATGTTGTGTTGCTGAAGGATGACCCTCCTCCACCATCACCTGATTCTAAAGCCGTGAGCAACACAACAACACCAAATACTTCTTGCTGA 2115 0.4303 MPHPPVPPPSSLISTLLFFSLLLPTYVSSDAEGYTACEPFSCGKFNDISYPFWSKDQQEYCGHPKFKLDCQQDNVTIDIMSQTFQVIDMNQTSKVLEIARLDLWADPCTNDYVNVKLDPGFFRYTSNDDEYTLLYDCGSLGYTSGSVNIGEAIAFNCPVEGGLRDAYFVLSTEVVNLLSLGCKNSITVSALREAVKGDSLVGNVLQKGFEVEWSGVNENQCDGCSRSGGRCGHNASMDAFICLCLNHQPDDDSCNKILARSPAATPRVTPAKSQLPPYSQIIPKQSPESPHAPSTQNVGRKIAIGVGSAAAGALIVGICVYLFIRRRKNSYVMSYIQSRSLSSDPSSKDTEKGSQSYTQSIIPGVHLFSYEELEVATNYFDSTKELGEGGFGTVYFGKLRDGRSVAVKRLYENNYRIVAQFMNEIKILTRIDHPNLVKLFGCTSRHSRELLLVYEYISNGTVADHLHGHLSKPGTLPWHIRMNIAVETASALKFLHLKGIIHRDVKTNNILLESNFCVKVADFGLSRLFPHQATHVSTAPQGTPGYVDPEYHECYQLTNKSDVYSFGVVLVELISSLPAVDITRHRHEINLANMAINKIHNQTLQELVDRNLGFESDFKVRKMISGVAELAFQCLQSSKDMRPSMEEVVETLKDIQSDGKNRSQPEVMDISSTSDDVVLLKDDPPPPSPDSKAVSNTTTPNTSC* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1637 704 Pfam Wall-associated receptor kinase C-terminal 181 245 IPR032872 -
Pvu4g1637 704 Pfam Wall-associated receptor kinase galacturonan-binding 37 99 IPR025287 GO:0030247
Pvu4g1637 704 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
Pvu4g1637 704 Gene3D Phosphorylase Kinase; domain 1 350 456 - -
Pvu4g1637 704 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.2 13 693 - -
Pvu4g1637 704 Pfam Protein tyrosine and serine/threonine kinase 383 652 IPR001245 GO:0004672|GO:0006468
Pvu4g1637 704 SUPERFAMILY Protein kinase-like (PK-like) 362 671 IPR011009 -
Pvu4g1637 704 SMART serkin_6 380 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1637 704 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 693 IPR044652 -
Pvu4g1637 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 500 512 IPR008271 GO:0004672|GO:0006468
Pvu4g1637 704 ProSiteProfiles Protein kinase domain profile. 380 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1637 704 MobiDBLite consensus disorder prediction 655 704 - -
Pvu4g1637 704 Gene3D Transferase(Phosphotransferase) domain 1 457 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1637 Pvu-Chr4 43652304 43662279 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1637 293 703 Receptor kinase-like Gene Family AT1G25390 54.265 1.27e-141 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu4g1637 PK_Tyr_Ser-Thr 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1637 - - gmx:100800873 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1637 4 43652304 43662279 Pvu4g1637 4 43652304 43662279 ECH