Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1634 ATGAGATTTAGGTGTGATCTCTTTGAGTGCTGCTTCACTAGCACATCTTCTGACACATTTCCAAAGCACAGAAGCCTGAAGTGGCGAGTCTTTCCCTACAAGGAAATTGCAAAAGCCACAAATAATTTTGATCAATGTCTTGAAAAGGGAGTAGGAAAGAAAGGCTTTATCGATCAGTACCACGGAACACTTGAGGATGGACGCGAGATTACAGTCCAGCGCTTTAAAGAAGACAAACGCTACATATTGCAACAGTTTATCAATGAAACTGTTATCCTAAATTACTTACCCCACAAAAATATTGTGTCAATTTACGGGTGCACTTCTCATCACGAGGAACCTCTGCTAGTGCATGAACACCTATCCAATGGAAATCTTGATGCACATTTTGTAAGTGAAAGGAACGAAAACATTGCACTACCTTGGCTTAAAAGATTAGATATAGCCATTGATATTGCAAATGCATTGGACTATCTTCACTATTACGGCATCATCCACCGCAATGTGAAGTCCAGCAATATTCTCCTAGATGTGAACTTTTCTGCTAAGCTTGCTAACCTTCATTTATCATGCAAACTTCCAGATGGAGTTCCTGTTGACACCATTCATGTTACTAGTGATAGAGTAGGTTCAGGTGGTTATATAGATCCAGAGTATTTGACAAAAGGCCGGCTTAGTGTAAAAATTGATGTTTATAGCTTTGGAGTGGTGTTGTGTGAGCTTCTATCATCAAAGCTGGCAAAATACTGGACTCTCAACGAGGAGAATAATTTTGGTACCCTTTTAAGTAGAAAAATTGAAAATAAAACTTTGGTGGAGCTGTTTGATCCAAGACTTGGGTTCCAATCAAACCTTCATATCAAGCAGGTGATGACTGCTACAGCAGAGCTTGCAGTTCTCTGCATGAAATGTCCACAAGAATCGAGACCAAACATGGAACAGGTGATAGAGATTCTCAGTCTGATAAAGCAAGGGAGATATGGAACAAACTCTCACTCAACCAAATCTTTGAAAATCTTCCACCATGCTGAACTTGAAGAAGCTACCAACAATTTTGGCACTTGCCTTGGAAAGGGAGGGTATGGCAGCGTATACTATGGAAAACTTAAAGATGGGCTAGAGGTTGCAATAAAATGTTTCCATGACGAGAATGAGACAGAAGAGACCATAAAGCAATTCATGAAAGAATCTGAGATCTTAGGTCTCTTGCACCATCAAAATCTGGTCTCACTTTATGGCCGCACTTCTCGCCATCGCAAGAAACACATGCTAGTGTATGAGTATATCTCCAATGGCACTCTTTCGAAACATCTTCATGAGTCTTCCAGTGTCAAACTACCATGGCAAACTAGATTGAATATTGCCATTGAAACTGCAACTGCCTTAGAATTTCTTCATGACTCAAGTATCATCCACCGTGATGTGAAAGGGAGTAACATTCTCCTGGATGAAAATTTTACTGTTAAAGTTGCTGATTTTGGATTCTCACGGTCTCTTCCAGATCATGTTACTCATGTTACAACTATTCCAGTAGGAACTCGTGCTTACATAGATCCTGACTACTACATATCTGGAAGGGTCAGTAACAAAAGTGATGTCTATAGTTTTGGAGTGGTCTTGTTTGAACTCATATCATCAATCCACCCAACTTTAGTTGCAGGCACAGATAATGAGACTCTTGCACAGTTTGCAAAGAGAAAAATCTTGAACAATGAATTAAATGAGATAGTTGATCCATCCTTTTTGTGTGGTTCTGATGATAACACTTTGGAAATGGTAACAGCAGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCCAGGGAGTTCAGACCATCCATCAAACAGGTGCTAGAGACTCTGGAGGGCATAAGGAAAGGAAAATGGGGATTCAACCAGATAACATAG 1908 0.4015 MRFRCDLFECCFTSTSSDTFPKHRSLKWRVFPYKEIAKATNNFDQCLEKGVGKKGFIDQYHGTLEDGREITVQRFKEDKRYILQQFINETVILNYLPHKNIVSIYGCTSHHEEPLLVHEHLSNGNLDAHFVSERNENIALPWLKRLDIAIDIANALDYLHYYGIIHRNVKSSNILLDVNFSAKLANLHLSCKLPDGVPVDTIHVTSDRVGSGGYIDPEYLTKGRLSVKIDVYSFGVVLCELLSSKLAKYWTLNEENNFGTLLSRKIENKTLVELFDPRLGFQSNLHIKQVMTATAELAVLCMKCPQESRPNMEQVIEILSLIKQGRYGTNSHSTKSLKIFHHAELEEATNNFGTCLGKGGYGSVYYGKLKDGLEVAIKCFHDENETEETIKQFMKESEILGLLHHQNLVSLYGRTSRHRKKHMLVYEYISNGTLSKHLHESSSVKLPWQTRLNIAIETATALEFLHDSSIIHRDVKGSNILLDENFTVKVADFGFSRSLPDHVTHVTTIPVGTRAYIDPDYYISGRVSNKSDVYSFGVVLFELISSIHPTLVAGTDNETLAQFAKRKILNNELNEIVDPSFLCGSDDNTLEMVTAVAELAFQCVQCPREFRPSIKQVLETLEGIRKGKWGFNQIT* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1634 635 Gene3D Phosphorylase Kinase; domain 1 18 120 - -
Pvu4g1634 635 PANTHER TYROSINE KINASE FAMILY PROTEIN 26 635 - -
Pvu4g1634 635 ProSiteProfiles Protein kinase domain profile. 43 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1634 635 Gene3D Transferase(Phosphotransferase) domain 1 121 327 - -
Pvu4g1634 635 Pfam Protein tyrosine and serine/threonine kinase 352 572 IPR001245 GO:0004672|GO:0006468
Pvu4g1634 635 Pfam Protein tyrosine and serine/threonine kinase 60 318 IPR001245 GO:0004672|GO:0006468
Pvu4g1634 635 SMART serkin_6 41 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1634 635 SMART serkin_6 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1634 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Pvu4g1634 635 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 26 635 IPR044652 -
Pvu4g1634 635 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Pvu4g1634 635 Gene3D Transferase(Phosphotransferase) domain 1 429 630 - -
Pvu4g1634 635 ProSiteProfiles Protein kinase domain profile. 350 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1634 635 SUPERFAMILY Protein kinase-like (PK-like) 328 625 IPR011009 -
Pvu4g1634 635 SUPERFAMILY Protein kinase-like (PK-like) 21 323 IPR011009 -
Pvu4g1634 635 Gene3D Phosphorylase Kinase; domain 1 328 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1634 Pvu-Chr4 43622117 43626503 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1634 337 625 Receptor kinase-like Gene Family AT1G25390 50.508 1.90e-85 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pvu4g1634 PK_Tyr_Ser-Thr 1.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1634 - - vra:106773095 1132.86