Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1616 ATGAGCGAAAGCACAGAGACCCAGAAGCGTGAATGTGCCGATTCAGAGGGCGAGAAGGATGGTGTTGCATCCAAGAAGCCAAAGATTGAGTCTTGTGCAAAGGGTTCCGATGATAATGGCGTAAAGGAGCCATCTTTCCTCGTTGAAGCGGATGCCGCCGAAGACAAGGGCTCCAGGCTCACGATGGAGGATGCGTGGGTCGTGCTTCTCGATGCAAGTTTAGATTATCCTGGAAAATTGAGATGTGCACATTTTGCAATTTATGATGGACATGGAGGGCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATAGGAATGTTCTTTCTGCAGGATTACCACGTGAGTTGTATGATGCAAAGGCAACTAAACGATCTATTCTGAATGGTTTCCTTAAAACTGACGAGTCTCTTCTTCAAGAAAGTGCTGAAGGGGGGTGGCAGGATGGGGCTACTGCCGTATGTGTTTGGGTATTGGGACAAAGAGTTGCGGTTGCTCATATAGGAGATGCTAAGGCAGTATTAGCTCGGTCAACTGAGGGATCTCAAAATCCAGATGGTGTCCAGGCGCTGAAGGCTATTGTTTTGACTAGAGAACACAAGCCTATCTTCCCACTGGAGCGGACACGCATTCAGAAGTCAGGGGGTTTTGTGAGCCCAGATGGGCGATTATTAGGGCGTCTTGAAGTTTCTAGAGCTTTTGGAGATCGCCAGTTTAAAAAGGTTGGTCTTGTTGCAAGCCCGGATGTCTATACTTTTGAAGTTACCAATACAGAGCATTTCATCATTCTTGGATGTGATGGCTTGTGGGGGGTATTTGGACCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGGCTACCTGTTGCCACTGTGTGCCGTCGTCTTGTAAGGGAGGCTGTCCGCGAGCGCCGCTGTAAAGATAACTGCACTGCCATTATTATTGTGTTTAAGCACAAATAA 972 0.4712 MSESTETQKRECADSEGEKDGVASKKPKIESCAKGSDDNGVKEPSFLVEADAAEDKGSRLTMEDAWVVLLDASLDYPGKLRCAHFAIYDGHGGRLAAEYAQKHLHRNVLSAGLPRELYDAKATKRSILNGFLKTDESLLQESAEGGWQDGATAVCVWVLGQRVAVAHIGDAKAVLARSTEGSQNPDGVQALKAIVLTREHKPIFPLERTRIQKSGGFVSPDGRLLGRLEVSRAFGDRQFKKVGLVASPDVYTFEVTNTEHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLPVATVCRRLVREAVRERRCKDNCTAIIIVFKHK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1616 323 Pfam Protein phosphatase 2C 54 308 IPR001932 -
Pvu4g1616 323 ProSiteProfiles PPM-type phosphatase domain profile. 49 320 IPR001932 -
Pvu4g1616 323 SMART PP2C_4 35 318 IPR001932 -
Pvu4g1616 323 MobiDBLite consensus disorder prediction 1 42 - -
Pvu4g1616 323 MobiDBLite consensus disorder prediction 1 37 - -
Pvu4g1616 323 Gene3D - 25 323 IPR036457 -
Pvu4g1616 323 PANTHER PROTEIN PHOSPHATASE 2C 8 317 IPR015655 GO:0004722|GO:0006470
Pvu4g1616 323 CDD PP2Cc 53 320 IPR001932 -
Pvu4g1616 323 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 8 317 - -
Pvu4g1616 323 SUPERFAMILY PP2C-like 47 321 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1616 Pvu-Chr4 43410623 43415603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1616 46 272 PP2C-type Phosphatase Gene Family AT1G18030 72.174 2.51e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1616 K17500 - gmx:100815852 558.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1616 4 43410623 43415603 Pvu4g1616 4 43410623 43415603 ECH