Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1603 ATGAAGAACCTTCTTAAGAAGCTTCACATCATGTCTAACCGATCAGAGAATGAACAAGGGTCTTCTTCATCCAAGGGCAGCAAGTCCAATATTGGTTCATCTTCCAAGAAGATTTTGCGCTCAAAGCCCACTCAAAGTTCTGAGCAAAAGCCCTTATCTGGGCTCTCCAGTTGGTTGCATTCAGTTGCCAATAGGCAGAGTCCTAGTCCTCCTCCATCTTTGAGCCAGGCAGGGGGCGTGAGAATGGAGGCATCTGATGCAGTGAGCAGTGGTGGTTTGGATGTTGTGTCAGATTCAGCTAGGCTTGATTCAGAGTCTAGTGCTTCCAGGGATCCTGAAGTGGAGGAAGAGTATCAGATACAGTTGGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGGTTATACACCAGGTGAAGTTGTGGCCTACCGGTATTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTTGGATGGTTTCTACGATCTGTATGGGAACTTAACTGAGTCAAAGCCTACAAGAATGCCTTCCCTTGAAGATTTGCAACTGCAAGGAACATCAATCTCAGGTAGTGGTTCGTGCGAAGCTGTCTTGGTCAATAGGGCTGCTGATTCAAATTTGTTGAAACTTGTGCAAAAGGCCCAGGAGTTGACTGGCAGATCAAGTTCAGATATTGAAGTTATAGATAGCAATTTGGTTCGCAAGCTTGCAATATTTGTGGCTGACTATATGGGTGGACAAGTTGGAGATCCTGAAAGTATGACAAGAGCATGGAGGAGTCTTAGTTACAGTCTCAAAGCAACCCTTGGTAGCATACTTTTGCCACTTGGTTCTCTGACTATTGGATTGGCTCGGCATCGGGCATTGTTGTTTAAGGTTCTAGCTGATAGTTTGGGCATCCCATGCCGGTTGGTGAAGGGGCTGCAATATACAAGTTCCGACAACGTGGCTATAAACTTTGTCAAGATTGATGATGGAAGGGAATACATTGTTGATCTAATGGCAGATCCTGGAACACTTATTCCATCTGATGCAACTGGATCACAGATAGAGTGCGATGAATCTTCCTATGTGGCCAGTCCTTCATCTAGAGACCCTGATTCCTCACATGTAGCATCATCCAGCAGTGGTGTTGGAAGTTCATACGAAGAAACTTTGGATTTGGGGATGTTGGACAAAGGAAACAGATCAAAACATATAGGTAAATTATCTGATGTAAGCGTGCCCTCTACGGGAAAGGAAGAATCAATAAGACCCTTGTTTGAATTTAAAAGCCCTCACAATGTTGAGAAGATCGCGGAGCAGGAAGCTCCTGGCAGACCTAATCATCCACATGTACATGCAAGATCTCCATCTTGGACTGAAGGGATCAGTTCTCCTGCAGTACGTAGGATGAAAGTCAAAGATGTTTCTCTATACATGATTGATGCTGCAAAGGAAAACCCTCACTTAGCCCAGAGACTTCATGACGTTTTACTTGAAAGTGGTGTGGTTGCTCCTCCAAATCTATTTTCTGAAATTTATGATGATGACTCAGGTTCCTCAACTGAGGCCTACTTTCCAACAGAAGAAAATGATGAACCTAAGCAGGGAAGTGGACAGAAAGAAGCTGAGCTTGATGGTAATCTCTTTCATGCTCGAGTTTTGCCTCCTTTGGCTCACAATAGAGTTCAGAGCAAAGCAAGTTCTAGTGATCAGGTAGAGCATTCTAAACCTGTAGAAGGTTTAGGAATCAACCTTCCTCTTTATACAAGGGAACCAGCTGTACAGCATATACCATCTCAGGTAAAATATGGTCAAAATGTTGCTGCTGCTGCAGCTGCCGCCGCTGCTGTTGTTGCATCTTCTATGGTAGCTGCGGTGGCAAGATCTAGCATTGACTCAAACATAGATCTTCCAGCAGCAGCAGCTGCTACTGCTACTGCTGCAGCTGTAGTAGCAACAACTGCTGCTGTCAGTAAACAGTATGAACAAGGCAGTCGAAGCGATGGAGATACAGACAGTGCTGGTTATGACCTGAAGGGTAGTGGTGATGGAGAACATATAGCTTTAGGAGCAAATTCAGAAGCTGACCGAAGATCTGATAGATCAGTATTAAGTAATGATAGCACAAAATCTGACTCTGCATTAGATGATCAGGATGTTGCTGAGGTTGACATTCCGTGGGAGGAAATCTCCCTCGGTGAGCGTATTGGACTTGGATCATATGGGGAGGTGTATCGTGGTGAATGGCGTGGAACTGAAGTTGCTGTAAAGAGATTTCTAGATCAAGATATATCTGGTGAATCACTTGAAGAGTTCAAAACTGAAGTCAAAATAATGAAAAGATTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTAACTCGACCTCAAAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGAAGTTTGTATAGATTGCTTCATAGACAAAACAATCAATTAGATGAGCGAAGGCGTTTGAAAATGGCTATTGATGCTGCTCGAGGTATGAACTATTTGCACAACTGCACTCCAGTGATAGTGCATCGGGATTTGAAGTCCCCAAATCTTCTCGTTGACAAAAATTGGGTTGTGAAGGTATGTGATTTTGGCTTATCACGGATGAAGCATAGCACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCCGAGGTGTTGAGAAATGAACCTTCAAATGAGAAGTGTGATGTATATAGCTTTGGGGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGTGGAATGAATCCAATGCAAGTTGTTGGTGCTGTGGGTTTCCAGCATCGCCGTCTTGACATTCCTGATGATGTAGACCCTACCATAGCAGACATTATCCGGAAATGCTGGCAAACAGATCCAAAGTTGAGACCTACATTTGTGGAAATATTGGCGGCTCTGAAGCCATTACAGAAGACAATTTTTAGCTCTCAAGTGCCTCGACCAAGTGCATCGGGGAAGCATGAGAAGGGTCAGTCATCGCGTGTTGTAGAAGACACAGCAAGATAG 3093 0.4423 MKNLLKKLHIMSNRSENEQGSSSSKGSKSNIGSSSKKILRSKPTQSSEQKPLSGLSSWLHSVANRQSPSPPPSLSQAGGVRMEASDAVSSGGLDVVSDSARLDSESSASRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPGYTPGEVVAYRYWNYNALGYDDKILDGFYDLYGNLTESKPTRMPSLEDLQLQGTSISGSGSCEAVLVNRAADSNLLKLVQKAQELTGRSSSDIEVIDSNLVRKLAIFVADYMGGQVGDPESMTRAWRSLSYSLKATLGSILLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYTSSDNVAINFVKIDDGREYIVDLMADPGTLIPSDATGSQIECDESSYVASPSSRDPDSSHVASSSSGVGSSYEETLDLGMLDKGNRSKHIGKLSDVSVPSTGKEESIRPLFEFKSPHNVEKIAEQEAPGRPNHPHVHARSPSWTEGISSPAVRRMKVKDVSLYMIDAAKENPHLAQRLHDVLLESGVVAPPNLFSEIYDDDSGSSTEAYFPTEENDEPKQGSGQKEAELDGNLFHARVLPPLAHNRVQSKASSSDQVEHSKPVEGLGINLPLYTREPAVQHIPSQVKYGQNVAAAAAAAAAVVASSMVAAVARSSIDSNIDLPAAAAATATAAAVVATTAAVSKQYEQGSRSDGDTDSAGYDLKGSGDGEHIALGANSEADRRSDRSVLSNDSTKSDSALDDQDVAEVDIPWEEISLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKTEVKIMKRLRHPNVVLFMGAVTRPQNLSIVTEFLPRGSLYRLLHRQNNQLDERRRLKMAIDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPTIADIIRKCWQTDPKLRPTFVEILAALKPLQKTIFSSQVPRPSASGKHEKGQSSRVVEDTAR* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1603 1030 Pfam Ethylene-responsive protein kinase Le-CTR1 156 359 - -
Pvu4g1603 1030 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1028 - -
Pvu4g1603 1030 Gene3D Transferase(Phosphotransferase) domain 1 822 1006 - -
Pvu4g1603 1030 MobiDBLite consensus disorder prediction 1005 1030 - -
Pvu4g1603 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Pvu4g1603 1030 SMART serkin_6 743 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1603 1030 SUPERFAMILY Protein kinase-like (PK-like) 729 994 IPR011009 -
Pvu4g1603 1030 MobiDBLite consensus disorder prediction 703 718 - -
Pvu4g1603 1030 Gene3D Phosphorylase Kinase; domain 1 736 820 - -
Pvu4g1603 1030 MobiDBLite consensus disorder prediction 374 399 - -
Pvu4g1603 1030 ProSiteProfiles Protein kinase domain profile. 743 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1603 1030 MobiDBLite consensus disorder prediction 1 116 - -
Pvu4g1603 1030 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1028 - -
Pvu4g1603 1030 CDD STKc_MAP3K-like 749 995 - -
Pvu4g1603 1030 Pfam Protein tyrosine and serine/threonine kinase 744 994 IPR001245 GO:0004672|GO:0006468
Pvu4g1603 1030 MobiDBLite consensus disorder prediction 14 74 - -
Pvu4g1603 1030 PRINTS Tyrosine kinase catalytic domain signature 817 830 IPR001245 GO:0004672|GO:0006468
Pvu4g1603 1030 PRINTS Tyrosine kinase catalytic domain signature 856 874 IPR001245 GO:0004672|GO:0006468
Pvu4g1603 1030 PRINTS Tyrosine kinase catalytic domain signature 903 913 IPR001245 GO:0004672|GO:0006468
Pvu4g1603 1030 PRINTS Tyrosine kinase catalytic domain signature 922 944 IPR001245 GO:0004672|GO:0006468
Pvu4g1603 1030 PRINTS Tyrosine kinase catalytic domain signature 966 988 IPR001245 GO:0004672|GO:0006468
Pvu4g1603 1030 MobiDBLite consensus disorder prediction 526 554 - -
Pvu4g1603 1030 MobiDBLite consensus disorder prediction 453 473 - -
Pvu4g1603 1030 ProSitePatterns Protein kinases ATP-binding region signature. 749 770 IPR017441 GO:0005524
Pvu4g1603 1030 MobiDBLite consensus disorder prediction 672 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1603 Pvu-Chr4 43245035 43255790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1603 1 1013 MAP Kinase Kinase Kinase AT1G73660 61.463 0.0 1116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pvu4g1603 PK_Tyr_Ser-Thr 8.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1603 - - vra:106769971 1760.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3384 2 48718453 48727539 Pvu4g1603 4 43245035 43255790 PCT