Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1601 ATGGATCGTAACAAAAAGGGAACAGGGGAGGTAGAGTTCTTTACTGAGTATGGAGAGGCAAGTAGGTATGACATCATAGAAGTGATTGGAAAAGGGAGTTATGGTGTTGTGTGTTCTGCTGTTGACACTCACACTGGGGAAAAAGTTGCAATCAAGAAAATCAATGATGTTTTTGAGCATGTGTCGGATGCCACAAGGATCCTAAGAGAAATCAAACTCCTTCGTTTGCTTCGACATCCTGATATAGTTGAAATCAAGCATATAATGCTTCCTCCCTCACGAAGAGAGTTCAGGGATGTCTATGTTGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTGATCAAGGCAAATGATGATCTTAGCCCTGAGCACTATCAATTTTTCTTGTACCAACTTCTTAGAGGCCTGAAATTTATACACACAGCAAATGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTAGCTAATGCTGATTGCAAACTAAAAATATGTGATTTTGGACTTGCTCGAGTTTCATTTAATGAGGCTCCATCAGCTATATTCTGGACAGACTATGTTGCAACCCGGTGGTATCGTGCACCTGAACTGTGTGGTTCTTTTTTCTCAAAATATACCCCCGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCGGGAAAAAATGTAGTGCACCAATTGGATCTCATAACTGACCTGCTTGGTACTCCTCCTACTGAAACCATTTCTAAGATTCGAAATGAGAAGGCTAGAAGGTACCTTGGTAGCATGAGGAAAAAACAACCTGTTCCATTCACCAAAAAGTTTCCAAATGCAGATCCAGTGGGTCTTCATTTACTGGAGAGATTGCTTTCATTTGATCCTAAAGATCGTCCACAAGCTGAAGAGGCACTAAGTGACTCTTATTTCCATGGTTTGTCAAATGTGGACCGTGAACCGTCCACTCAACCCATTTCAAAGCTGGAGTTTGAGTTTGAGAGGAGAAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCTCAGATGCTCCAAGAATATCTTGTTGGTGGAGAACAAACAAGCTTCATGTATCCAAGTGGGGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAGCACTCTGGCAAAGGTGAACGAGGCACTCCATTGTTGAGGCACCATGCTTCCTTGCCTAGAGAGCGAGTTCCTGCTCCCAAGGATGAAAATAATCAAAATGATGATGTCGAAAAGACCACCGGAGAAATCGATGCGACAGATTCTGGAAATCCAGATGAACAAAACGGACACTCCAGGCCAAACTGCAGTGCACGTAGCCTGTTGAAGAGTGCCAGCATTAGTGGTTCAAAGTGTATAGATGTGAAAAAAAAAAAAGTTGAAGAGGAGGAGGAGCCAGCTAAAGAGGTCAGTGATGAGACTCTGGATGAGTTGACACAGAAGGTTGCTTCCCTCCATGCCTAG 1518 0.4223 MDRNKKGTGEVEFFTEYGEASRYDIIEVIGKGSYGVVCSAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDVYVVFELMESDLHQVIKANDDLSPEHYQFFLYQLLRGLKFIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLITDLLGTPPTETISKIRNEKARRYLGSMRKKQPVPFTKKFPNADPVGLHLLERLLSFDPKDRPQAEEALSDSYFHGLSNVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLVGGEQTSFMYPSGVDRFKRQFAHLEEHSGKGERGTPLLRHHASLPRERVPAPKDENNQNDDVEKTTGEIDATDSGNPDEQNGHSRPNCSARSLLKSASISGSKCIDVKKKKVEEEEEPAKEVSDETLDELTQKVASLHA* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1601 505 MobiDBLite consensus disorder prediction 474 493 - -
Pvu4g1601 505 MobiDBLite consensus disorder prediction 410 434 - -
Pvu4g1601 505 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 448 - -
Pvu4g1601 505 CDD STKc_TDY_MAPK 22 359 - -
Pvu4g1601 505 Pfam Protein kinase domain 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1601 505 SUPERFAMILY Protein kinase-like (PK-like) 19 319 IPR011009 -
Pvu4g1601 505 MobiDBLite consensus disorder prediction 435 460 - -
Pvu4g1601 505 Gene3D Transferase(Phosphotransferase) domain 1 109 337 - -
Pvu4g1601 505 ProSitePatterns MAP kinase signature. 58 161 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pvu4g1601 505 SMART serkin_6 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1601 505 MobiDBLite consensus disorder prediction 410 460 - -
Pvu4g1601 505 Gene3D Phosphorylase Kinase; domain 1 38 360 - -
Pvu4g1601 505 ProSiteProfiles Protein kinase domain profile. 23 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1601 505 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 8 448 - -
Pvu4g1601 505 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1601 Pvu-Chr4 43209532 43215372 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1601 10 505 MAP Kinase Gene Family AT3G18040 80.396 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pvu4g1601 Pkinase 4.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1601 - - gmx:100776784 890.567