Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1580 ATGGTCTTCAAGGGAAGGTTCTTCTCTTCCAAGAAATCCGATTCCTCCAGCCCCGATGCGTCATCCAACAGTCCTCGATCTTTCTCATCCAATTCCCCTTCCAGATCCGACAAGAAGAAGGCTAAATCCGCCGCGCATCCAACTCTAGCAGCCGGAGGCAGCGGTGGCGGAGCTCTTGCTGCGTGTCGTCAGACGCAGGTGAAGGACGGGACCAAAAAGAAGGATGTGGTCAAGGGGAAGGAAAGTCAAACTCCGCCGCCGGAGGCTAGCAAGGAATCTCCGGTGAAGAAGTTGGCGGCGGGGGAAGGACGGGAATCGTCGGCGTCGGTGTCGCCGATTCTCGCGTCGTCGCTGGGGCTGAACAGGATCAAGACGAGATCGGGGCCGCTGCCGCAGGAGAGCTTCTTCGGGTTCAGGGGCGAGAAGGGAACGACGGCGCTCGGCGGTAGCAACCTCTCCCGCCCCGGCGTCGGCGTGCGCGGCGGCGATGGGAAGAAGAAGGAGGCGGCGAGCCTGAACAGGGTCGGGTTTCGTGAGGGTTCCCGTGGCGGTGCCCCTGCTGCCGGAGGTTGGGGCGATAACCGGAACAATTCTGACAGCGTGTCTACCTCGGGGAGCATGCCGTCTAGGGAGCAGAGTCCGGTGGTGTTGCCTCGGTCGCGGTTGCAGAACGGAGAGTCATCCTCGGAGGCCGCAGGCAACCAGGCATCATCATGGGCTCAGTCTGGAGGCTTAAGAAGTGAAGATGTTTGTACTCCAGAGGCAGCATATGATTTTGAAAACCCAAAGGAGTCCGAATCTCCTCGTTTTCAAGCCATATTACGTGTCACTAGTGCACCTAGAAAGAGGTTTCCTTCAGATATCAAAAGTTTTTCCCATGAGTTGAATTCGAAAGGTGTCTGGCCTTTTCCATTTTTGAAGCCTCGACGGTTAAATAACCTTGAGGAGATTTTGGTTGTTATTAGGGCAAAATTTGATAAAGCAAAGGAAGACGTAAACTCTGATCTAGCCATTTTTGCGGCAGATCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAATGGCAAGAGACAATTGAGGACTTGCTAGTTTTGGCAAGGAGCTGCGCTATGACTTCATCTGGGGAGTTTTGGCTTCAGTGTGAAAGCATAGTTCAGGAGTTGGATGATAGGCGTCAAGATCATCCTCCAGGGATGCTAAAGCAGCTTCACACTCGAATGCTTTTCATTCTCACAAGGTGTACCCGATTATTGCAATTCCACAAGGAAAGTGGTCTGGCTGAGGATGAACCTGTTTTCAATCTCCGTCAATCAAGAGTCTTGCATTCTGCTGGAAAATGTATTCCTCCTAGTGTGGGAAGGGATTCTAAAAGTTCAAGTGCTGCAAAGACATTAAAGCCTTCATCAAAAAAAGCTTTTAGTCAAGAACAGAGTATGATGGGTTGGAAGAAAGATGTTATGCAACCTGAAAATCTTTCACTTCCTGCTGATGACGACAATACAAAACACTTTGACTCTTCAAGCAGGGATCGAATGGCTTCTTGGAAGAAATTCCCATCTCCGTCAGGAAAAAGCCCTAAAGAAGCTGCTCAGTTGAAGGACCAAAATTATGGGAGAGTTGAATCTTCAAAGGCATCAAATAATAAGAGATTCCCTTCTGATGTGGATCTCTCTACCGCTAAGCCATCTGAGTTTCTTCCTATCAAAGATTCCTTGGATCATGTTTCCAAACACCAACATAAAGTTTCTTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAGAACTCGATAATTTGTCGTATATGTGAAGAGGAAGTTCCTACTTCACATGTTGAAGATCATTCAAGGATTTGTGCAGTTGCTGATAGATGTGATCAGAAGGGACTGAGTGTCAATGAGCGTCTTGTTAGAATTGCTGAAACACTAGAAAAGATGATGGAATCATGTTCACAAAAGGATTCCCAACAAATGGTGGGAAGTCCTGATGTTGCAAAAGTATCAAATTCTAGTATGACTGAAGAATCTGATGTTCCTTCTCCTAAACTTAGTGATTGGTCTCGCAGAGGCTCAGAGGACATGCTAGACTGTTTCCCTGAAACCGATAATTCTACTTTTATGGATGACCTAAAAGGATTACCACTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCAAGGTCACCATTGATGACACCACGAACAAGTCAGATTGACTTGCTCTTGGCAGGGAAGGGTGCTTATTCTGAACATGATGATCTGCTGCAGATGAATGAACTTGCTGATATAGCTCGATGTGTGGCAAATGCATCTCTGGATGATGATCGCACAAGTTCATATTTATTATCTTGTCTTGATGACTTGCGGGTTGTTGTAGAACGAAGGAAATTTGATGCACTTACTGTGGAGAGCTTTGGAACACGTATTGAGAAGCTGATACGAGAGAAGTATCTGCAGCTCACTGAGTTGGTGGATGTTGAAAAGATAGATACAGAGAGCACGGCAGATGATGATCTTTTGGAAGATGATGTGGTTCGTAGCTTGAGAACAAGTCCAATCCATTCATCAAGGGATAGGACCTCTATTGATGACTTTGAAATTATAAAACCTATCAGTCGTGGGGCATTTGGAAGGGTTTTCTTGGCTAAAAAAAGAACAACTGGTGATCTTTTTGCAATTAAGGTTCTCAAGAAGGCAGATATGATCCGGAAAAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTACGCAATCCTTTTGTGGTTCGGTTCTTCTATTCTTTTACATGTCGTGATAATTTATATCTTGTCATGGAGTATCTGAATGGAGGTGACCTGTATTCATTATTAAGGAATTTAGGTTGCTTAGACGAGGAAGTTGCCCGTGTATATATCGCTGAAGTGGTGCTTGCGTTAGAGTATTTGCATTCACTCCGTGTGGTTCATCGAGATTTGAAGCCTGACAATTTATTGATAGCACATGATGGTCACATCAAGTTAACAGACTTTGGGCTTTCTAAAGTTGGTCTCATCAACAGCACAGATGATCTGTCTGGCCCAGCAGTGAATGGGACATCCCTACTTGAAGAAGACGAGACTGATGTATTGACATCTGAGGATCAATGGGAAAGGAGGAAGAAACGCTCTGCAGTGGGCACGCCTGATTACTTAGCCCCAGAGATACTTTTGGGAACTGGACATGCGTATACTGCCGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTATTCCACCCTTCAACGCAGAGCATCCTCAGAATATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGGAGTTCCTGAAGAGATGAGTCCTGAAGCACAGGATCTTATTGATCGATTATTGACAGAAGATCCTAATCAAAGACTAGGATCAAAAGGCGCATCGGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAAGCTGCATTTGTTCCTGCTTCTGAGAGCGCTCTAGATACCAGTTACTTCACTAGTCGCTACTCATGGAATACTTCTGATGGCCTTGTATATCCAGCCAGTGATGTTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGCAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGCGGGGGTCTTGCTGAGTTTGATTCTGGGGCATCTGTCAATTACTCTTTCAGTAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCATCTATCAACTATGATCTCACTAAAGGATGGAAAGATGACCCGCCAACGAATTCTAGTGCATAG 3882 0.4552 MVFKGRFFSSKKSDSSSPDASSNSPRSFSSNSPSRSDKKKAKSAAHPTLAAGGSGGGALAACRQTQVKDGTKKKDVVKGKESQTPPPEASKESPVKKLAAGEGRESSASVSPILASSLGLNRIKTRSGPLPQESFFGFRGEKGTTALGGSNLSRPGVGVRGGDGKKKEAASLNRVGFREGSRGGAPAAGGWGDNRNNSDSVSTSGSMPSREQSPVVLPRSRLQNGESSSEAAGNQASSWAQSGGLRSEDVCTPEAAYDFENPKESESPRFQAILRVTSAPRKRFPSDIKSFSHELNSKGVWPFPFLKPRRLNNLEEILVVIRAKFDKAKEDVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLVLARSCAMTSSGEFWLQCESIVQELDDRRQDHPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEPVFNLRQSRVLHSAGKCIPPSVGRDSKSSSAAKTLKPSSKKAFSQEQSMMGWKKDVMQPENLSLPADDDNTKHFDSSSRDRMASWKKFPSPSGKSPKEAAQLKDQNYGRVESSKASNNKRFPSDVDLSTAKPSEFLPIKDSLDHVSKHQHKVSWGYWGDQQNNSEENSIICRICEEEVPTSHVEDHSRICAVADRCDQKGLSVNERLVRIAETLEKMMESCSQKDSQQMVGSPDVAKVSNSSMTEESDVPSPKLSDWSRRGSEDMLDCFPETDNSTFMDDLKGLPLISCKTRFGPKSDQGMTTSSAGSMTPRSPLMTPRTSQIDLLLAGKGAYSEHDDLLQMNELADIARCVANASLDDDRTSSYLLSCLDDLRVVVERRKFDALTVESFGTRIEKLIREKYLQLTELVDVEKIDTESTADDDLLEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVNGTSLLEEDETDVLTSEDQWERRKKRSAVGTPDYLAPEILLGTGHAYTADWWSVGVILFELLVGIPPFNAEHPQNIFDNILNRKIPWPGVPEEMSPEAQDLIDRLLTEDPNQRLGSKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYPASDVEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSGASVNYSFSNFSFKNLSQLASINYDLTKGWKDDPPTNSSA* 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 109 123 - -
Pvu4g1580 1293 SMART serkin_6 882 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 727 749 - -
Pvu4g1580 1293 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 28 1291 - -
Pvu4g1580 1293 ProSiteProfiles AGC-kinase C-terminal domain profile. 1172 1276 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 498 514 - -
Pvu4g1580 1293 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 1291 - -
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 193 245 - -
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 9 32 - -
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 651 692 - -
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 448 559 - -
Pvu4g1580 1293 Coils Coil 311 331 - -
Pvu4g1580 1293 Gene3D Phosphorylase Kinase; domain 1 880 1200 - -
Pvu4g1580 1293 Pfam Protein kinase domain 882 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 1221 1238 - -
Pvu4g1580 1293 Gene3D Transferase(Phosphotransferase) domain 1 966 1189 - -
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 652 683 - -
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 1216 1239 - -
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 1 247 - -
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 455 478 - -
Pvu4g1580 1293 ProSiteProfiles Protein kinase domain profile. 882 1171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1580 1293 CDD STKc_MAST_like 888 1176 - -
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 67 81 - -
Pvu4g1580 1293 SUPERFAMILY Protein kinase-like (PK-like) 879 1210 IPR011009 -
Pvu4g1580 1293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1001 1013 IPR008271 GO:0004672|GO:0006468
Pvu4g1580 1293 MobiDBLite consensus disorder prediction 538 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1580 Pvu-Chr4 43012538 43026537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1580 1 1287 AGC Kinase Gene Family AT3G17850 66.591 0.0 1622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Pvu4g1580 Pkinase 1.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1580 - - gmx:100776995 2265.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1580 4 43012538 43026537 Pvu4g1580 4 43012538 43026537 ECH