Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1579 ATGCAACATTCTCACACACTCTTTCTCACCATTCTCTTTCTCTTCTTCTTCTTCTTCTCTTCCACACTCTCCGACCTCTCGTCGGAGCGCGCGGCGCTCCTCGCCCTGCGCTCCGCCGTGCGCGGCCGCACGCTTCTCTGGAACACCACCTTCCCTTCGCCCTGCGCCTGGCCTGGCGTCCAATGCGATGATGCCAAAGCCACCGTGGTGGAGCTCCACCTCCCCGCCGTCGCTCTCTCCGGTGAGCTTCCCGCCGGTGTGTTCCCGGAGCTCCCCAACCTCCACACCCTCAGCCTCCGCGTCAACTCTCTCTCCGGCGCCCTCCCCGCCGACCTTGCTGCCTGCGCCGCCCTCCGCAACCTCTTCCTCCAACAGAACTACTTCTCCGGCGAGGTGCCGGCGTTTCTCTCCGGCATGACCGGCCTCGTCCGGCTTAATTTGGCCTCCAACAACTTTTCCGGGCCAATTCCGGCGCGGTTCGGGAACCTCACCCGGTTGAGGACCCTTTTCCTTGAGAATAATCGGCTCAATGGTTCGTTACCCGGTTTGGAAGAACTCGGTGAATTGGCTCAGTTTAATGTCTCTTACAACATGTTAAACGGTTCTGTTCCTAAAAAGTTGCAGACTTTTGATAAAGATTCGTTTTTGGGCAATACCCTTTGTGGGAGGCCACTTGGGATTTGTCCCTGGGATGTTGGGGGTGGTGAGAGTGGTGTAAATGGGAGTTCAAATTCAAGTGGGGTTGGAGGGGGTGGAGGGAGTGTGATTGGAGGGGAAAAGAAGAAGGGGAAGCTTTCTGGGGGTGCAATTGCAGGGATTGTTGTTGGGTGTGTGGTGGCTCTTCTGTTTGTTGTGTTTGCTTTGATTCTTTTGTGTAGAAGAGGGAACAAGACTAGGAGTGTTGATAATGTTAGCAACATGGTGGGCTTGAAGGAGGAGCCTCAACACAATGGAGAGTTGGGAATTGAGGGCGGCAATTTGGAGAGTGGGGGTGGGGATGGGAATTCGGTGGCGGTGGCGGTGGCGGCAGTGGGTGGGAATGGAGTTGGTGGTGGAAGTGGTGGAGATAAGAAGTTGGTGTTTTATGGTAATAAGGTGAAGGTGTTTGATTTGGAGGATTTGCTAAGGGCTTCTGCTGAGGTGTTGGGAAAAGGAACTTTTGGGACTACCTATAAGGCTGTTTTAGAGGATGGGCCTGTGGTGGCTGTGAAGAGGTTGAGGGATGTCACGGTTTCGGAGAAGGAGTTTAAGGAGAAGATTGATGCTGTGGGAGTGATGGATCATGAAAATTTGGTGCCTCTCAGGGCTTACTATTATAGCAGGGATGAGAAACTTCTTGTTCATGATTACATGCCAATGGGAAGCCTATCTGCAATTTTGCATGGAAACAAAGGAGCTGGTAGGACACCGTTGAATTGGGAAATGAGATCAGAGATTGCAATAGGAGCTGCTCGTGGCATCGAGTACCTACATTCACAAGGGCCTAGTGTTTCTCATGGAAACATAAAGTCCTCCAACATCCTCTTAACCAAATCCTATGATGCCAGGGTGTCTGATTTTGGCCTTGCACACCTTGTTGGCCCCTCATCCACACCCAACAGGGTGGCTGGCTACCGTGCCCCCGAAGTAACCGATCCACGCAAAGTTTCTCAGAAGGCTGATGTATACAGCTTTGGAGTGTTGCTCTTGGAACTTCTGACTGGAAAAGCTCCTACACATGCCCTCTTGAATGAGGAAGGAGTGGACCTTCCAAGATGGGTCCAATCAGTGGTTAGAGAGGAATGGAGTTCAGAGGTGTTTGATATTGAGCTCCTAAGGTATCAGAATTCTGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCAGTGGATTGTGTAGTTCCATACCCTGATAACCGACCTTCAATTTCTCAAGTGAGACAACGCATAGAAGAGTTACGTAGGTCTAGCATGAAAGAGGGTACTCAAGACCAAATCCAACAACCTGATTTCATCGATGATATAGATGATGTATCCTCTAGATGA 2022 0.5114 MQHSHTLFLTILFLFFFFFSSTLSDLSSERAALLALRSAVRGRTLLWNTTFPSPCAWPGVQCDDAKATVVELHLPAVALSGELPAGVFPELPNLHTLSLRVNSLSGALPADLAACAALRNLFLQQNYFSGEVPAFLSGMTGLVRLNLASNNFSGPIPARFGNLTRLRTLFLENNRLNGSLPGLEELGELAQFNVSYNMLNGSVPKKLQTFDKDSFLGNTLCGRPLGICPWDVGGGESGVNGSSNSSGVGGGGGSVIGGEKKKGKLSGGAIAGIVVGCVVALLFVVFALILLCRRGNKTRSVDNVSNMVGLKEEPQHNGELGIEGGNLESGGGDGNSVAVAVAAVGGNGVGGGSGGDKKLVFYGNKVKVFDLEDLLRASAEVLGKGTFGTTYKAVLEDGPVVAVKRLRDVTVSEKEFKEKIDAVGVMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSAILHGNKGAGRTPLNWEMRSEIAIGAARGIEYLHSQGPSVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWSSEVFDIELLRYQNSEEEMVQLLQLAVDCVVPYPDNRPSISQVRQRIEELRRSSMKEGTQDQIQQPDFIDDIDDVSSR* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1579 673 Gene3D Ribonuclease Inhibitor 140 228 IPR032675 -
Pvu4g1579 673 ProSiteProfiles Protein kinase domain profile. 376 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1579 673 Gene3D Transferase(Phosphotransferase) domain 1 451 670 - -
Pvu4g1579 673 PANTHER OS05G0588300 PROTEIN 2 673 - -
Pvu4g1579 673 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 673 - -
Pvu4g1579 673 ProSiteProfiles Leucine-rich repeat profile. 165 187 IPR001611 GO:0005515
Pvu4g1579 673 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Pvu4g1579 673 SUPERFAMILY Protein kinase-like (PK-like) 380 642 IPR011009 -
Pvu4g1579 673 Gene3D Ribonuclease Inhibitor 28 139 IPR032675 -
Pvu4g1579 673 MobiDBLite consensus disorder prediction 646 673 - -
Pvu4g1579 673 ProSitePatterns Protein kinases ATP-binding region signature. 382 404 IPR017441 GO:0005524
Pvu4g1579 673 Pfam Protein kinase domain 379 640 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1579 673 Gene3D Phosphorylase Kinase; domain 1 355 450 - -
Pvu4g1579 673 CDD STKc_IRAK 382 645 - -
Pvu4g1579 673 SUPERFAMILY L domain-like 41 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1579 Pvu-Chr4 43007023 43009773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1579 25 662 Receptor kinase-like Gene Family AT1G48480 59.196 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu4g1579 Pkinase 1.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1579 - - gmx:100781597 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3411 2 48888454 48891466 Pvu4g1579 4 43007023 43009773 PCT