Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1577 ATGTGTTGCAAAAACCGCTGCATCAGTTACATTTGCTGCGCAATCATCACCCTCATATCAGTGTTCATAGTTTCCTCAATCATCTTCTGGATAGTCATCTCACCATCAAATGTGAAGTTCCATGTAAGTGAAGCCTCCCTCACACAATTCAACCTCACAAACAACAACTCCTTGTATTACAGCTTGAAGGTCAACGTCACAGTGAGAAACCCCAACAACAACATCGTAGTGTACTATAGGGGGATCAAAGCGATAGCATGGTACAAAGATAATGATTTTGGTTGGGTAAACTTAACACCCTTTGACCAAGGCCACAAGAACACCACGGTCCTTCAAGTACTGTTTGAAGGACAAAGTGTGCTTAAGCTCAAACCTAGACAACTTGGTGAGTACAAAGAAGAGACAAGTGTGGGGGTTTACAATGACATGGCTGTCGATTTTGATTTCAGAATCAGAGCCAAATTTGGAAGGTTCAAGAGTAGTCGTTTCGATCCTCCCATTGTTCAGTGTCGGCGTTTGAGTGTTCCTTTGATTTCTAAGGCTAAATCATCACCTCCTTTTAGTGTCACCAAATGTAGAATGGATCGTTCTTTCTTTGTTGATCGTCATACTGAAGCTGCATGA 624 0.4199 MCCKNRCISYICCAIITLISVFIVSSIIFWIVISPSNVKFHVSEASLTQFNLTNNNSLYYSLKVNVTVRNPNNNIVVYYRGIKAIAWYKDNDFGWVNLTPFDQGHKNTTVLQVLFEGQSVLKLKPRQLGEYKEETSVGVYNDMAVDFDFRIRAKFGRFKSSRFDPPIVQCRRLSVPLISKAKSSPPFSVTKCRMDRSFFVDRHTEAA* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1577 207 PANTHER HARPIN-INDUCED 1 17 197 - -
Pvu4g1577 207 PANTHER OS05G0367900 PROTEIN 17 197 IPR044839 GO:0098542
Pvu4g1577 207 Pfam Late embryogenesis abundant protein 65 162 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1577 Pvu-Chr4 42986320 42986943 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1577 32 151 SNARE and Associated Proteins AT1G32270 35.537 1.53e-21 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1577 - - gmx:100783747 322.398