Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1576 ATGTTTTTCAGACCGCGCTGCAGCTTATGCTGCATCTTCTTCACAATCTACACCCTTATGCTCATGTTCATGCTTTCCTTCTTGCTCTTCTGGATAATCATATCTCCTTCAAGTGTCAAGTTCCATGTAACTGATGCCTCTCTAACACAGTTCAACCTCACAAGCAACAGCACCTTGCATTACAACTTCAAGGTCAATGTCACAGTCAGAAACCCCAACAACAACATCGTAGTGTACTACAGGAGGATCACAGCAATAGCTTGGTACAAAGATAATGGTTTTGGTTGGGTGAGCTTGACACCCTTTGACCAAGGCCACAAGAACACCACCTTCCTTCAAGCAGTGTTTGTAGGGCAGAGGGTGATTAAGCTCAAATCTAAACAACTTGGTGAGTATAAAGAGGAGGCAAATGTTGGGATTCACAAGGACTTGGCTGTGGATTTTGATCTCGGAGTCAGAGCCAAGTTTGCAAGGTTCAAGAGTAATACTTTCAGTCCACCCATTGTTCAGTGTCGTCGCTTGAGAGTTCCTTTGATTTCTAATGGCAAATCAGCACCTCCTTTCTCTGTCACCAGATGCAGCAGTGGCTCTTTCTTTTCTGGTCGTGATGCTGATGCATAG 621 0.4444 MFFRPRCSLCCIFFTIYTLMLMFMLSFLLFWIIISPSSVKFHVTDASLTQFNLTSNSTLHYNFKVNVTVRNPNNNIVVYYRRITAIAWYKDNGFGWVSLTPFDQGHKNTTFLQAVFVGQRVIKLKSKQLGEYKEEANVGIHKDLAVDFDLGVRAKFARFKSNTFSPPIVQCRRLRVPLISNGKSAPPFSVTRCSSGSFFSGRDADA* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1576 206 PANTHER OS05G0367900 PROTEIN 18 198 IPR044839 GO:0098542
Pvu4g1576 206 Pfam Late embryogenesis abundant protein 66 161 IPR004864 -
Pvu4g1576 206 PANTHER HARPIN-INDUCED 1 18 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1576 Pvu-Chr4 42982517 42983137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1576 33 178 SNARE and Associated Proteins AT1G32270 31.293 1.62e-20 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1576 - - gmx:100784278 346.28