Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1569 ATGGAATCTGAGAGGCCTAACACTACTATTGAGACCTACAAAGAACTACAACAGCAAGAAGATGATGACGAAGAAGAAGAAAAAAACAATGAGATCCTCAAGAGAAGAATCTCCAGCCACCCTCTCTATGGACTGCTGGTTGAAGCTCACTTGGACTGTTTGAAGGTTGGTGACATTTCCAACTTGGAGAGAGAGCTGAAGATAGATGAGATGCAAGCAGCAGAGAAGCAAAACTTGGGCATGTTCAGCCAATCTGAGCTTGATCTCTTCATGGAAGCATATTGCATGGCACTTGGGAAGCTTAAAGAAGCAATGGTGGAACCACAGCAGAAGTCGATGGCTTTCATAAACAACATGCATTCACAACTTAGGGAGATCACTAAGCCAACCTTGCCTGCACCACCTTCTGACACTGCATCTTCTAGTGAGTGCAAATTCAGAAGAAATTAG 450 0.4378 MESERPNTTIETYKELQQQEDDDEEEEKNNEILKRRISSHPLYGLLVEAHLDCLKVGDISNLERELKIDEMQAAEKQNLGMFSQSELDLFMEAYCMALGKLKEAMVEPQQKSMAFINNMHSQLREITKPTLPAPPSDTASSSECKFRRN* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1569 149 Coils Coil 59 79 - -
Pvu4g1569 149 Pfam KNOX2 domain 85 127 IPR005541 GO:0003677|GO:0005634
Pvu4g1569 149 MobiDBLite consensus disorder prediction 1 30 - -
Pvu4g1569 149 SMART KNOX1_2 31 77 IPR005540 GO:0003677|GO:0005634
Pvu4g1569 149 MobiDBLite consensus disorder prediction 128 149 - -
Pvu4g1569 149 Coils Coil 16 36 - -
Pvu4g1569 149 PANTHER FUSED COMPOUND LEAF 1 14 124 - -
Pvu4g1569 149 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 14 124 - -
Pvu4g1569 149 Pfam KNOX1 domain 33 57 IPR005540 GO:0003677|GO:0005634
Pvu4g1569 149 SMART KNOX2_2 77 128 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1569 Pvu-Chr4 42862174 42866910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1569 31 123 Homeobox Transcription Factor Family AT4G08150 36.364 1.21e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1569 - - gsj:114367439 229.565