Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1567 ATGGCTCTCATTCGCCACCACCCTCGTTACCCTAACCTCCGTCTTCCACTCCTAGACCTCTTCGAGCGCCGCTCCGTTTTCCCTCTCCCCGCCACCACCGTCAAATCTGTCAGTGACAACGGCATTAACATTGGTGACCTTGAGAAGCTCCTCATTCTTGGTCATGGTAATGGTGGCACTGTGTACAAAGTGTGCCATAAAGACACTTCTGCAACCTATGCACTGAAGATTATCCGCAGCAATGTTCATCGCGCACTTTCAGAAATCTCAATCCTTCGTCGTGCCACTCACTGTCCCTATGTGGTTGGCTTCCATGGCTCTTTTCAGAAGTCCAACGACAAAATG 345 0.5043 MALIRHHPRYPNLRLPLLDLFERRSVFPLPATTVKSVSDNGINIGDLEKLLILGHGNGGTVYKVCHKDTSATYALKIIRSNVHRALSEISILRRATHCPYVVGFHGSFQKSNDKM 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1567 115 ProSitePatterns Protein kinases ATP-binding region signature. 53 76 IPR017441 GO:0005524
Pvu4g1567 115 Gene3D Phosphorylase Kinase; domain 1 27 115 - -
Pvu4g1567 115 ProSiteProfiles Protein kinase domain profile. 47 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1567 115 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 9 110 - -
Pvu4g1567 115 SUPERFAMILY Protein kinase-like (PK-like) 36 110 IPR011009 -
Pvu4g1567 115 Pfam Protein kinase domain 49 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1567 115 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 9 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1567 Pvu-Chr4 42843850 42844194 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1567 1 110 MAP Kinase Kinase Gene Family AT1G73500 47.414 4.17e-20 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pvu4g1567 Pkinase 1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1567 K20604 - pvu:PHAVU_004G1479000 236.498