Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1565 ATGGCACTAGTCCGCCACCGCCGACAACCCAATCTCCGCCTCCCCCTCCCGGAGTCCTCAGAGCGCCGCCCCCGCTTCCCGCTCCCCCTCCCTCCCACCGCCCCCAAACCCGCCGGCGGAGACGCAATCACCGCCGCCGACCTCGAGAACCTCGCCGTGCTCGGCCACGGCAACGGCGGCACAGTCTACAAGGTCCGCCACAAGACCACCTCCGCCACCTACGCGCTCAAAATCATCCACAGCAACGCCGACGCCACCACGCGCCGCCGCGCGTTCGCGGAAAGCTCCATCCTCCGCCGCGCCACCGACTGCCCCCGCGTCGTCCGCTTCCACGGCTGCTTCGAAAAGCCCTCCGGCGACGTGGCCATCGTCATGGAGTACATGGACGGCGGCTCCCTCGAAACCGCCCTCACCACCAGCGGCACGTTCTCCGAGAAGCGACTCGCCGCGGTGGCGCGTGATATCCTGGAGGGCCTCGCGTGCCTCCACGCGCGCAACATCGCGCACCGCGACATAAAACCTGCGAACATCCTCGTAAACTCACAGGGAGAAGTTAAGATTGCAGACTTTGGAGTCAGCAAACTCATGTGTCGCGCGCTCGAAGCGTGCAAGTCCTATGTTGGCACGTGCGCCTACATGAGTCCCGAACGGTTCGACCCGGAAGCATCTGGCGGCAACTACAATGGTTTTGCGGCGGATATATGGAGTCTGGGTTTGACCCTTTTTGAACTCTACGTGGGTCACTTCCCATTTCTTGAAACGGGTCAACGACCCGATTGGGCTACCCTTATATGCGCTATTTGCTACGGTGACCCTCCCAGCCTCCCGGAGACCGCGTCAGCGGAGTTTCGCAGCTTCGTCGAATCCTGCCTCAAGAAGGAGTCCGGTGATAGGTGGACGGCAGCACAACTCTTGACCCACCCGTTTGTGTGCAAGGACCCGGAAACTCACTAA 954 0.6258 MALVRHRRQPNLRLPLPESSERRPRFPLPLPPTAPKPAGGDAITAADLENLAVLGHGNGGTVYKVRHKTTSATYALKIIHSNADATTRRRAFAESSILRRATDCPRVVRFHGCFEKPSGDVAIVMEYMDGGSLETALTTSGTFSEKRLAAVARDILEGLACLHARNIAHRDIKPANILVNSQGEVKIADFGVSKLMCRALEACKSYVGTCAYMSPERFDPEASGGNYNGFAADIWSLGLTLFELYVGHFPFLETGQRPDWATLICAICYGDPPSLPETASAEFRSFVESCLKKESGDRWTAAQLLTHPFVCKDPETH* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1565 317 SMART serkin_6 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1565 317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Pvu4g1565 317 CDD PKc_MAPKK_plant_like 46 310 - -
Pvu4g1565 317 ProSiteProfiles Protein kinase domain profile. 48 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1565 317 SUPERFAMILY Protein kinase-like (PK-like) 47 312 IPR011009 -
Pvu4g1565 317 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 314 - -
Pvu4g1565 317 MobiDBLite consensus disorder prediction 1 40 - -
Pvu4g1565 317 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 2 314 - -
Pvu4g1565 317 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1565 317 Gene3D Transferase(Phosphotransferase) domain 1 125 317 - -
Pvu4g1565 317 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Pvu4g1565 317 Gene3D Phosphorylase Kinase; domain 1 35 124 - -
Pvu4g1565 317 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1565 Pvu-Chr4 42835942 42837073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1565 1 313 MAP Kinase Kinase Gene Family AT1G73500 60.510 1.46e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pvu4g1565 Pkinase 1.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1565 K20604 - gmx:100804100 529.635