Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1536 ATGGCAGACACAAATTCAGTTGAAGTGATTTTGGATTTTCTGAGGAGGAATAGGTTCACCCGAGCTGAGGCGGCTTTGCGTAGTGAGCTCAGTAACTGTTCTGATGTGAATGGTTTCTTGCAGAAGCTTACATTGGAAGAAAAGGACTTGCGTGGCGGGTTGCAGAATGATAAGGGGAAGCCTGTAGTAGAAAATCATGGGTTGGATTCTCGTGACGGTGTTGAAGTTTCTAAAGAACTGATTGTGAAGGAAATAGAATGTGGGACTGGTAGAAATGCTGCAGAAGAAAGCAAATGGAAAACTGTTGCTCCCACAGGGGAAAGGAACAAGTCTAGTGAAGTTGTTGGGACGAGTGAAAAAAACTTTACTTTCTCAAAGGGTTCGGAGGACAGTGTTCTTGATTTGTACTCGTGGAAGTTTAATCCCAGCAATGGTCCTGTGGAACCTTACCAAAACGATAGTGGAAGTAGACCGAGTAATGCTTTGAAGGCCCCCATATCTCAACAATCAAAGTATCAAACTGGTGAAGCTCCTGATGCAACCAACAGTAATGTGAAATCTGGGGAGGCAAATAATGTACCTGCTGAAAAGACAACTTTGTGGCTTGGAAGTAGTGGTAAAGCCTCTACAGAACCGAAGTATGACTTTATGCCTAATAAAGAACCTAAGGAACATGATCTGCAGCTCAAATTTAATGCTTCATCTCTTAAAGAGAACTTGATAGATAATCACTTGTCAAGGACTGATGAGAATGTGAGTTCATCTACAGATCTATGGAAAGATTGTTCTGTGAAGACTGTTTTCCCTTTCTCAAAGGGGGATATGTCTACAAGCTACAACGGTTCAACTTATTCTGACAGACAAGAGGAGAAGAGAAGGGCAGAAAATGGTGATGTCATGACGTCAATAAAAGAGCAAGTGGATGAAGTAGGAAGAGCTCTTTACTTAGGAAAGTTGCAAGGCAGTTCTGGCAGCTTAAATTTTCCTCTTGCACTGGAGAATCCAAAGGAAGAGTTTCCTAGGCTTCCTCCTGTAAAAATCAAGTCAGAAGATAAGCCCTTGACTTTTAATTGGGGAGATAAGTTTGAGTCTGACGGACTGGCTGTGAAACTCGCTGGTGCCGACAACTCCTTACTTATTGGGTCATATTTGGATGTCCCTATTGGACAAGACATTAAAACTACAGGTGTGAGGAAGGCTATAGGGGGCAGTTGGCTGTCTGTAAGTCAAGGGATTTCAGAGGATACATCTGATCTTGTATCAGGTTTTGCAACAATTGGGGATGGGTTGAGTGAATCTCTTGATTATCCAAATGAATATTGGGACTCTGATGAATATGATGATGATGAAGATGTTGGGTACATGAGACAACCCATTGAGGATGAGGCCTGGTTTTTGGCACACGAAATTGATTACCCCAGTGACAATGAAAAGGGGACGGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAAGAGGATGATCAATCTTTTGCTGAGGAGGATTCTTATTTCTCTGGTGAGCAATATATTCTACCAAAAAATGTTGAGCCAGTCATTTCAGATGATCCTATTGGTCTAACAATTACTGAAATGTATGGAAGAACCAATGGTAACGATGTAATGACTCAATATGATACACAACTGATGGACGTTGAAGAACTGAATCTGATGCATATAGAACCTGTCAGGCAGGGCTTTGTCACTCACCAAAATGATCTTATCATGCTGGGAGATGGGCAGGTTCTGAATCATAGTGCGAGGCCACGAATTGAGGACATGGAAGATGATCAGCACGGTTCAGTTAGATCAATTGGAGTGGGGATCAACAGTGATGCTGCTGATATTGGTAGTGAAGTGCATGGAAGTTTGATTGGTGGTAGTAGTGAGGGGGATTTAGAATATTTTCGTGATCATGATACTGTGCGCAGTGGCTCCAAACACACTCATCAGGATTTGGACAAGAGTTCTTTTAACAAATCAGGAAAAAATAACAAGAAAAATGACAAGAATGAATCAAATAAATATGTCATAGACAGTGATAAAGATGCATGCTCGCAGATAAAAACACATACTGATGGGAACTTTTCATTCCCTCAATCTCTTAGAGATGGCCAGATGATTTCGGCTGGCTCCAGTAAGTCCCTATTTTCGAGTAATTGTAATGTAGATGAAACAGAAGACTGTCTTAATGCCTTTGTGGGCTCTGATGACATGCTTTCTTCTTGGAGGCGGAAGAGTAGTGATTCTTCGCCTGTTAAAAGTTCTAGGGATGATAATAATGCTATTGTGGTAAGATCCAGAAACTCTTCTCCAACTACGGTCTCAAATTATGGGTATACTGATGGAGAGCATGTCAAGCTAGAAAAGGATGAAAAGATAAGTGTGGTAAGGGAAGACGATATAGGTGCATCACTAGAGGATGAGGAGGCAGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAGGCTCAAGAGGAAGAATTTGAAACCTTCAATCTAAAGATCGTGCACAGGAAAAACAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCGCTATCATGTCACCGAGTATCTTGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACAGGCATGGATGTCTGTGTTAAGATTATAAAGAACAACAAAGATTTCTTTGACCAAAGCCTTGATGAGATCAAGCTTCTTAAGTATGTCAATAAGCATGATCCTTCAGACAAGTTCCACCTTCTAAGATTGTATGATTATTTCTATTATAGAGAACACTTGTTAATAGTATGTGAACTGCTTAAAGCCAACTTATATGAGTTTCACAAATTTAATCGAGAATCAGGGGGGGAAGTTTATTTCACGATGCCAAGGTTGCAGTCCATCACCATTCAGTGTTTGGAGGCACTTCAGTTTTTGCACAGTCTTGGACTAATACATTGTGACTTGAAGCCAGAGAATATTTTGGTTAAAAGCTATAGCAGATGTGAAGTGAAGGTTATTGATCTCGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCGTATGTTCAGTCCAGGTCTTATCGTGCTCCTGAGGTTATTTTGGGGCTTCCATACGACAAGAAGATTGATATCTGGTCACTTGGATGCATCTTGGCAGAACTTTGTACGGGCAATGTCCTCTTCCAAAATGATTCTCCTGCAACATTACTTGCTCGGGTGATCGGGATCATTGGCCCAGTTGATCAAAGTTTACTTGCCAAAGGACGTGATACATATAAATACTTCACAAAAAATCATATGCTTTATGAGCGGAATCAGGAAAGCAACAGGTTAGAATACCTGATTCCAAAAAAGACCTCATTGAGGCATAGATTACCAATGGGAGACCAAGGCTTCATCGACTTTGTTGCCCATTTGCTCGAGGTTAACCCAAAGAAGCGACCTTCTGCATCTGAGGCCCTGAAGCACCCATGGTTATCATACCCTTATGAACCAATATCATCTTAA 3537 0.4142 MADTNSVEVILDFLRRNRFTRAEAALRSELSNCSDVNGFLQKLTLEEKDLRGGLQNDKGKPVVENHGLDSRDGVEVSKELIVKEIECGTGRNAAEESKWKTVAPTGERNKSSEVVGTSEKNFTFSKGSEDSVLDLYSWKFNPSNGPVEPYQNDSGSRPSNALKAPISQQSKYQTGEAPDATNSNVKSGEANNVPAEKTTLWLGSSGKASTEPKYDFMPNKEPKEHDLQLKFNASSLKENLIDNHLSRTDENVSSSTDLWKDCSVKTVFPFSKGDMSTSYNGSTYSDRQEEKRRAENGDVMTSIKEQVDEVGRALYLGKLQGSSGSLNFPLALENPKEEFPRLPPVKIKSEDKPLTFNWGDKFESDGLAVKLAGADNSLLIGSYLDVPIGQDIKTTGVRKAIGGSWLSVSQGISEDTSDLVSGFATIGDGLSESLDYPNEYWDSDEYDDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEEDDQSFAEEDSYFSGEQYILPKNVEPVISDDPIGLTITEMYGRTNGNDVMTQYDTQLMDVEELNLMHIEPVRQGFVTHQNDLIMLGDGQVLNHSARPRIEDMEDDQHGSVRSIGVGINSDAADIGSEVHGSLIGGSSEGDLEYFRDHDTVRSGSKHTHQDLDKSSFNKSGKNNKKNDKNESNKYVIDSDKDACSQIKTHTDGNFSFPQSLRDGQMISAGSSKSLFSSNCNVDETEDCLNAFVGSDDMLSSWRRKSSDSSPVKSSRDDNNAIVVRSRNSSPTTVSNYGYTDGEHVKLEKDEKISVVREDDIGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPSDKFHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPVDQSLLAKGRDTYKYFTKNHMLYERNQESNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1536 1178 SMART serkin_6 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1536 1178 Gene3D Transferase(Phosphotransferase) domain 1 921 1169 - -
Pvu4g1536 1178 Pfam Protein kinase domain 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1536 1178 MobiDBLite consensus disorder prediction 747 766 - -
Pvu4g1536 1178 MobiDBLite consensus disorder prediction 647 679 - -
Pvu4g1536 1178 SUPERFAMILY Protein kinase-like (PK-like) 856 1171 IPR011009 -
Pvu4g1536 1178 ProSiteProfiles Protein kinase domain profile. 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g1536 1178 Coils Coil 819 839 - -
Pvu4g1536 1178 MobiDBLite consensus disorder prediction 750 766 - -
Pvu4g1536 1178 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1176 - -
Pvu4g1536 1178 MobiDBLite consensus disorder prediction 144 197 - -
Pvu4g1536 1178 PANTHER - 2 1176 - -
Pvu4g1536 1178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 993 1005 IPR008271 GO:0004672|GO:0006468
Pvu4g1536 1178 MobiDBLite consensus disorder prediction 475 505 - -
Pvu4g1536 1178 CDD PKc_DYRK_like 867 1169 - -
Pvu4g1536 1178 Gene3D Phosphorylase Kinase; domain 1 861 948 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1536 Pvu-Chr4 42526556 42534615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1536 866 1164 MAP Kinase Gene Family AT5G19010 31.034 1.90e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pvu4g1536 Pkinase 1.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1536 - - gmx:100786225 2133.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3424 2 48964031 48976243 Pvu4g1536 4 42526556 42534615 PCT