Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1532 ATGAATGCTTCAATGAGGAAAAAGGTTCAAAGGAATTGTAAGATAAGAGGCTACAATCTCAAAGTCGATGCTCTCGACGAGATCCTCTCCTTCGCCTCTCGATTCGAAGGCAACGAAGAAGAAGCCATCGATCTCCTCCTCGACAAGCTCGACGAGCTCGAAAATTCACTGAAATCCACCATAATCGACAAGGACACGGTGAACCGCGCGGTGAGCCTGCTGCTGGAAGTTGTGGGGGATGACTCCGATCCCGGCGAGGGCACCGGAACCTCTTCCGCCTTTCGCGTGATCGATGCGTTTCACGTCCCGAAGTTTAAATACGACACTATCAGAAAGCAGTTCTACGAGCATACAGGCAGCTTGTCTATTCACGGAGAAGCATCTGGTAAAGCAGCTTTGTACAGAGATAGGTTTCTATTATTGTCCCAGAGGCTCTCTCGTGACCAGCATTTTTCCAAACCTGCTTTTGAATCTGAATTCTCCCATTTCGGGAGTTGTGAGATATCTCCTATTCAATCTCTGGTTGGGCAAACTGGTAGAAGATGGGTGATGGGCGTAATATCTCAGCTGGAAGATGGTCATTACTATTTGGAAGACCTTACAGCTGCAATAACTACAGGACTCTTTTCAGAGAACACTATAGTTGTGGTCGAAGGGGAGATGCTTCTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTTCCTCCATTGGAGGATAGAAATAAGTCACTGAAAGTACTTTCAGGGCATGACTTTTTTGGTGGTGGTACTCTTACAAAAGAGGAAACTATTAGACTGGAAGAGATGGAGAAAAGAGCAGTAAATGACATGTTTGTCATACTTTCTGATGTTTGGCTAGACAAAGAAGAGGCTTTGACAAAGGTAGAGACTATTCTGGATGGTTTTGAGAGTGTGGAAGTGGTTCCTTCCTTATTTGTTTTCATGGGAAACTTCTGTTCTAGGCCATGTAACCTTTCATTTCATTCTTATTCGAGCCTCAGAATGCAATTTGGTAAGCTGGGGGAAATGATTGCTGCCCATACACGGCTGAAAGAGCAGAGTCGATTTCTTTTTATTCCAGGTCCTGATGATGCAGGTCCTTCTACAGTTCTTCCTAGGTGCGCTTTACCAAAATATTTAACTGAAGAGCTCCAAAAGCACATTCCCAATGCCATATTTTCAAGCAACCCTTGCAGGGTCAAATTTTATACCCAAGAAATTGTATTTTTCCGCCAGGATATGCTGCATAGAATGCGTCGCTCATGTTTGATGTCACCTTCTATAGAAGAAACCGATGATCATTTTCAACATCTTGTTGCTACCATAACCCATCAAAGTCATCTCTGTCCACTACCTCTAACTGTTCAACCTATCATTTGGAATTATGACCATTCTCTTTATCTTTATCCAACTCCACACACGATAGTTTTGGGTGACAGAAGTGCGCAGAAAGCATTCAAATACACAGGAATCACTTGTTTTAATACTGGTTCCTTCTCGATTGACAGCACGTTTGTGGCATATCGCCCCTGCTCTCAGGAAGTTGAATTGTCAGCCTTGTAG 1563 0.4363 MNASMRKKVQRNCKIRGYNLKVDALDEILSFASRFEGNEEEAIDLLLDKLDELENSLKSTIIDKDTVNRAVSLLLEVVGDDSDPGEGTGTSSAFRVIDAFHVPKFKYDTIRKQFYEHTGSLSIHGEASGKAALYRDRFLLLSQRLSRDQHFSKPAFESEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHYYLEDLTAAITTGLFSENTIVVVEGEMLLEGIFQVLTCGFPPLEDRNKSLKVLSGHDFFGGGTLTKEETIRLEEMEKRAVNDMFVILSDVWLDKEEALTKVETILDGFESVEVVPSLFVFMGNFCSRPCNLSFHSYSSLRMQFGKLGEMIAAHTRLKEQSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQDMLHRMRRSCLMSPSIEETDDHFQHLVATITHQSHLCPLPLTVQPIIWNYDHSLYLYPTPHTIVLGDRSAQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1532 520 PIRSF DNA_pol_epsilon_2 1 520 IPR016266 GO:0003677|GO:0006261|GO:0008622
Pvu4g1532 520 Pfam DNA polymerase alpha/epsilon subunit B 278 482 IPR007185 GO:0003677|GO:0006260
Pvu4g1532 520 Coils Coil 36 63 - -
Pvu4g1532 520 Gene3D - 2 72 - -
Pvu4g1532 520 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 5 519 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1532 16 477 Core DNA Replication Machinery Family AT5G22110 69.492 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1532 K02325 - gmx:100784116 865.914