Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1529 ATGGTGATCACATCCACTGCTACACACCCAGATGAACAAGCACAGAGCATATTTTCTACTTTTGCTTCCAGATATGTGCGTGAACCTATTCCCAGGTTCAAGATACCAGAGAAATCAATACCAAAGGATGCTGCTTATCAGATAATAAACGATGAGTTGATGCTGGATGGCACACCAAGGCTCAACTTGGCTTCATTTGTGACCACTTGGATGGAGCCTGAGTGTGACAAGCTCATAATGGCTTCACTTAACAAGAACTATGTTGACATGGATGAGTACCCTGTCACCACTGAGCTCCAGAACCGGTGTGTTAATATAATAGCAAATCTATTCCACGCTCCTATAAATGAAGATGAGACTGCAGTAGGTGTGGGAACTGTGGGTTCATCAGAGGCAATAATGTTAGCAGGTTTGGCTTTTAAAAGGAAATGGAAGACCAAGAGAAAAGCAGAAGGCAAACCATATGACAAGCCTAACATAGTTACTGGGGCTAATGTGCAGGTTTGTTGGGAAAAATTTGCAAGGTACTTTGAGGTAGAGCTTAAGGAAGTGAAACTCAGTGAGGGATACTATGTGATGGACCCTGTGAAAGCAGTTGAAATGGTGGATGAGAACACCATCTGTGTTGCAGCCATTTTGGGATCAACTATGACTGGAGAGTTTGAGGATGTGAAACTTCTCAATGAACTTCTCACTGAAAAGAACAAGGAAACAGGTTGGGATACCCCAATTCATGTAGATGCTGCCAGTGGGGGGTTTATTGCTCCATTTCTGTATCCTGATCTAGAGTGGGATTTTCGTTTGCCATTGGTGAAAAGCATCAATGTTAGTGGTCACAAGTACGGTCTTGTATACCCTGGTGTTGGTTGGGTTGTCTGGAGGAGTAAGGATGACTTGCCAGATGAACTTGTTTTTCACATCAATTATCTTGGATCTGATCAGCCCACTTTCACATTGAATTTCTCTAAAGGATCCAGTCAAATTATTGCACAGTATTACCAACTTATTCGGCTCGGCTTTGAGGGTTATAAAAACATCATGGAAAATTGCTTGGAGAATACAAGAGTTCTTAAAGAGGGAATTGAGAGAACAGGGCTATTTAACATCATCTCCAAGGATATAGGGGTGCCACTTTTGGCCTTCTCTTTGAAAGACAGTAGCCAACACTCGGTGTTTGAGATATCAGATCAGCTGAGGAAATTTGGCTGGATAGTTCCAGCCTATACAATGCCACCAAATGCACAACATATTGCAGTCCTCAGGGTGGTGGTTAGGGAGGATTTCAGCTGTGGCTTGGCTCAGAGACTTGTTTCTGACATTGAAAAAGTTATGACTCTCTTGGACACACTTCCAAGCATCTTCTCTACCAAAACTGCTCATGTCACAGCCATCACCAATGAGATTAGTGAGAAGGTAAAGAAGAGTGCAATGGAGACTCAAAGAGAGATTATTTTGTACTGGAAGCGACTTGTGGATGGCAAGAAACTTGGAGCATGCTAA 1500 0.4267 MVITSTATHPDEQAQSIFSTFASRYVREPIPRFKIPEKSIPKDAAYQIINDELMLDGTPRLNLASFVTTWMEPECDKLIMASLNKNYVDMDEYPVTTELQNRCVNIIANLFHAPINEDETAVGVGTVGSSEAIMLAGLAFKRKWKTKRKAEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTMTGEFEDVKLLNELLTEKNKETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMENCLENTRVLKEGIERTGLFNIISKDIGVPLLAFSLKDSSQHSVFEISDQLRKFGWIVPAYTMPPNAQHIAVLRVVVREDFSCGLAQRLVSDIEKVMTLLDTLPSIFSTKTAHVTAITNEISEKVKKSAMETQREIILYWKRLVDGKKLGAC* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1529 499 SUPERFAMILY PLP-dependent transferases 10 445 IPR015424 -
Pvu4g1529 499 Gene3D - 1 68 - -
Pvu4g1529 499 Gene3D - 364 451 - -
Pvu4g1529 499 Pfam Pyridoxal-dependent decarboxylase conserved domain 36 384 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pvu4g1529 499 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 19 447 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pvu4g1529 499 PANTHER GLUTAMATE DECARBOXYLASE 1 499 - -
Pvu4g1529 499 Gene3D - 69 363 IPR015421 GO:0003824
Pvu4g1529 499 CDD DOPA_deC_like 62 442 - -
Pvu4g1529 499 PANTHER GLUTAMATE DECARBOXYLASE 1 499 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1529 Pvu-Chr4 42458046 42462497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1529 1 495 Calmodulin-binding Proteins AT5G17330 77.535 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1529 K01580 - gmx:100796475 928.702