Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1526 ATGGCTAATTTTGAGAAAGATGAGGTACCATTTCTATCAGATAGTCATCCCCAAGTATCAACTGAAGTCGTTGATTCTATACTCCCAAGGCATATATCTAGGACTCAAAGTGTATCAATTTCTATTCCTACGACTCTCACAGAGCCATATGAAAGAGATACTAATAGTGTGGGATACACTGGTCCCCTAAGGATTCAGAGAATAACTCCATTTAATCAGATGAGTGGTCCATTGCATGATACTAATAGACCCGAAAACCTTTCTCGGCAGAATAAAGTAGCACCCAAGCCACAACCAGAAGAAAGTAAGACTGAAATTTTTTCTTCATGCTGTGGCATCATGGGTGAAAATGATTTGCAGACCTACTATGCTAGCAAGAATGAACATTTAGTTAGGTCCGGTCCACAGGGAATGTGTAGTGATCCATATTGTACAACGTGCCCAACCTACTTCAAAGCTACTCAGCAAATTAATCATAAGTTTCGCAGTACTCTTTACGGGGAGGCCAAGGATTGGGCGAGAAAGCTTTTTACTTTCTTGATTCCCCATGTTCCTAGAATTATGAATCCTCACAATAAACTTGTACAACAATGGAGTAATTTTTTTACAATTTGTTGCTGGGTGACATTTTTTGTGGATCCGTTATTTCTCTTCTTGCTCTCTGTGCAGAAGGAAAATAAATGTATTGGTATAAACTGGGCTTTTACAAAAGTTCTTCTTGCACTTAGAAGCATCACTGATTTCATAAACTTTCTACGCATTGCTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGAGTCTAGGGTGGTTGGTGCTGGGGAGTTAGTCGACCATCCTAAGAAAATAGCTCTTCATTACATTAAGACATATTTTTTTATTGACTTATTTGTTGTACTTCCTCTTCCTCAGATATTCATATTGCTTGTCCTACAAAAGAACTTGGCGACAGATACTTCAGGAGCAAACTATGAAAATGAACTTTTCGTTGTTCTGATGATGCTTCAGTATTTTCCCAGATTGTTAAGGTTTTTTCCTATGGTGTGTTCTCCAGATGGATTAGTATTTGAGTCCCCATTGTTAAATATCTTTATAAATCTTTTGACCTTTATACTATCTGGACACGTTGTTGGGTCCTGGTGGTACCACTTCAGTTTGCGGAGGGTTAATCAGTGTCTAAAAGATGCCTGTGATACCACACATATTACTGGATGCACAAAATTCATTTATTGTGGGCATGGAAATACTGGAGAATATCAACATAATGCAAGTTGGCTTAATTGGACGAACAATGCTGTTGCAAGTGCTTGTTTCACTGAAGATGGTTTTCGTGATGGTTATGGTATCTTTCTTAAAGCTGTCAACCTTACCGCACATCCTAATATGCCAACCAGATATTTCTATTCATCATTTTGGGGATTCCAGCAACTTAGTACACTGACTGGGAATTTAACCCCTAGCTATTATCTTCCCGAAGTCCTTTTTACTAAGGCCATTCTTGGGTCAGGACTGTTGCTGTTTGCTCTTCTCATTGGAAACATACAGAAAATTCTTCAGGATTTTGGACGCAGGAAGCAGGAGATGTCAAATAGACAACGTGATGTTGAGCAATGGATGAGCCATTGGTGCTTAGCAGACCATCTACGAAGGAGAGTGCGACAAGCTGAACGTTTTAACTGGGCTGCAACAAAGGGGGTGAATGAAGAAATGCTCCTGGAGAATTTGCCAGAAGATCTCCAAAGGGATATTAGACGTCATCTCTTCACATTTATTAAGAAAGTTCGAATTTTTGCGTTGTTGGATGAGCATATCTTGGATGCCATATGTGAGAGGCTAAGACAAAAAACATATATCAAAGGAAGCAAAATTTTGTATGATGGTGGTTTGGTAGAGAAGATGGTTTTTATTGTGCGTGGAAAATTGGAGAGCGTTGGCGAAGATGGAATCAGTGCTCCCCTTTATGAAGGGAGTGTCTGTGGTGAAGAACTTCTGACATGGTGTCTTGAGCATCCCTTAGCAAGCAAAGGTTGCAGAAAAGAAAGTATTCCGAGGCCAAAGTTGGTGAGTAACAGAACAGTATGTTGCTTAACACATGTGAAGGCATTTTCCCTCAGAACAGCAGACCTTGAAGAAGTTATAGGCCTATTTGCAAGATTCTTTAGGAATTCCCGTGTTCGAGGAGCCATAAGGTATGAATCACCTTATTGGAGATGCTTTGCAGCAACAAGCATTCAGGTTGCATGGAGATACAGAAGGAAATGTCTTGGTCGTGCTAAAACTACACAATCAAATCAAACATAA 2298 0.3982 MANFEKDEVPFLSDSHPQVSTEVVDSILPRHISRTQSVSISIPTTLTEPYERDTNSVGYTGPLRIQRITPFNQMSGPLHDTNRPENLSRQNKVAPKPQPEESKTEIFSSCCGIMGENDLQTYYASKNEHLVRSGPQGMCSDPYCTTCPTYFKATQQINHKFRSTLYGEAKDWARKLFTFLIPHVPRIMNPHNKLVQQWSNFFTICCWVTFFVDPLFLFLLSVQKENKCIGINWAFTKVLLALRSITDFINFLRIALQFRLAYVAPESRVVGAGELVDHPKKIALHYIKTYFFIDLFVVLPLPQIFILLVLQKNLATDTSGANYENELFVVLMMLQYFPRLLRFFPMVCSPDGLVFESPLLNIFINLLTFILSGHVVGSWWYHFSLRRVNQCLKDACDTTHITGCTKFIYCGHGNTGEYQHNASWLNWTNNAVASACFTEDGFRDGYGIFLKAVNLTAHPNMPTRYFYSSFWGFQQLSTLTGNLTPSYYLPEVLFTKAILGSGLLLFALLIGNIQKILQDFGRRKQEMSNRQRDVEQWMSHWCLADHLRRRVRQAERFNWAATKGVNEEMLLENLPEDLQRDIRRHLFTFIKKVRIFALLDEHILDAICERLRQKTYIKGSKILYDGGLVEKMVFIVRGKLESVGEDGISAPLYEGSVCGEELLTWCLEHPLASKGCRKESIPRPKLVSNRTVCCLTHVKAFSLRTADLEEVIGLFARFFRNSRVRGAIRYESPYWRCFAATSIQVAWRYRRKCLGRAKTTQSNQT* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1526 765 SMART cnmp_10 595 730 IPR000595 -
Pvu4g1526 765 Pfam Ion transport protein 199 524 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu4g1526 765 Gene3D Helix hairpin bin 523 587 - -
Pvu4g1526 765 SUPERFAMILY cAMP-binding domain-like 522 720 IPR018490 -
Pvu4g1526 765 SUPERFAMILY Voltage-gated potassium channels 190 523 - -
Pvu4g1526 765 Gene3D Jelly Rolls 593 717 IPR014710 -
Pvu4g1526 765 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 5 759 - -
Pvu4g1526 765 MobiDBLite consensus disorder prediction 71 102 - -
Pvu4g1526 765 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 5 759 - -
Pvu4g1526 765 CDD CAP_ED 595 713 IPR000595 -
Pvu4g1526 765 ProSiteProfiles cAMP/cGMP binding motif profile. 595 673 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1526 Pvu-Chr4 42415893 42425153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1526 5 675 Ion Channels AT3G17700 54.148 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1526 K05391 - gmx:100795955 1142.87