Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1523 ATGGCTGATTTTGAAAAAGATGAGGTTCCTATGCTGTCTGAAACACGTGCTCAACTATCTGATGATGTCGTGGATTCTAATTTCCGGAGGCTAGTATCTAGAACACGAAGTGCTTCAATGTCGATTCCTATGGCTTCCTTGGAATCATATGAGAAAGAAACTAGTCTTGTGGGACATACTGGTCCCCTTCGTAGTGTGAGCAAAACCCCCTTTGTGCACATGAGTGGTCCATTGTATGCTACTCATGGAACTTCAAATCTTTCAGGTCAGAATAGTGCTGCGATAGGAAACAGAGTAGTGGAGAGTAAGACAGAAAAGTTTTCTTCTTTCAATGGCGCAAATGAAAATCGTTGGGATAATGACTATGATAGAAAGAATGAACACTTAATGAGGTCTGGGCAGCTGGGAATGTGTAATGATCCTTATTGTACCACTTGCCCCACTTATTTCAAGGCTGCTCAGCCAAGAACTCGAAAAACTTCAGCTATATTTGATCCCAAGTTCCAGCATAACTTTTACGGGGATGCTAAGGGTTTTGGAAGAAAATTTTTTTCCTTCTGCTATGCATATGTTCCTGGAGTTATGAATCCTCATGCAAAAGATGTACAGCGATGGAACAAGATTTTGGCCATTTTTTGCTTGGTGGCAATTTTTGTTGATCCATTATTTTTCTTCTTAATCTATGTGAAGAAGGATGATAAATGTATTGCTATCGATTGGACGATGACAACTACACTTGTTTTTTTTAGAAGCATTAATGATTTCATATATTTCTGTAACATTCTTCTCCAGTTTAGGCTGGCTTATGTTTCTCGTGAGTCAATGGTAGTAGGTGCTGGAGATTTAATTGACCATCCCAAGAAAATTGCTCTTAATTATCTGAAGAGTTATCTTTTTATCGACCTATTTGTTGTATTTCCTCTTCCTCAGATAATGATATTATCTGTCCTACCAAAATACCTGGGATCATCTGGAGCAAATTATGCTAAAAATCTTCTGCGTGCAGCAATCCTTGTGCAGTATTTTCCTAGATTATTCAGGTTTCTGCCTCTGCTAATTGGCCAGTCTCCAACAGGATTCATTTTTGAGTCAGCCTGGGCAAATTTCATCATAAATCTTCTCATTTTTATGCTATCTGGCCATGTTGTTGGTTCTTTCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGCTTGCGAAATGCCTGCCATGATTCTAAAATGGGTGGATGCTCAACATTTATTGATTGTGGCCGTGATTCTGGGCATAAGTCAGTTACATGGAGCCAAAATGTGAATGCCACTGCTTGTTTGAATTCCACTTCTGGGGTTTTTCAATATGGAGTCTATGTAAATGCTGTACCACTTACTATAGAAACTAGGGTGGTAAAAAAATATGTATACGCACTTTTTTGGGGCTTCCAGCAAATCAGTACTCTGGCTGGTAATCAAACCCCAAGCTATTTTGAGTGGGAAGTCCTTTTTACTATGGCCATCATAGGTTTGGGACTCTTACTTTTTGCGCTTCTCATTGGAAACATACAAAACTTTCTTCAGGCTCTTGGACGCAGGAGGCTAGAAATGCAACTTAGAGGCCGTGATGTTGAACAATGGATGAGCCACCGTCGCTTGCCAGAAGTTCTAAGAAGGAAAGTAAGAGAGGCTGAACGGTATAATTGGGCAGCAACAAGGGGAGTAAATGAAGAGATGCTTTTGGAGAATTTGCCAGAAGATCTCCAGACAGACATAAGACGTCATCTCTTCGACTTTGTTAAGAAAGTTCGCATCTTTGCCCTCATGGATGAGACTATCTTAGATGCAATTTGTGAGAGACTAAAACAAAAGACATACATCAAAGGAAGTAAAGTTTTGAGTCAGGGTTGTCTTGTAGAGAAAATGGTCTTTGTTGTTCGGGGGAAATTGGAGAGCTTTGGAGATGATGGAACTATTGTTCCCTTAAGTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCTGTAACAACAGATGGAAAAAAAGTAAGGGTTCAAGGGCAGAGGTTGCTGAGCAATAGGACTGTAAGATGCTTAACAAATGTGGAGGCATTTTCACTTCGTGCTGCAGACCTTGAGGAACTCACAATTCTTTTCACAAGATTCTTGCGGAATCCTCATGTTCTAGGAGCTCTAAGGTATGTATCACCTTATTGGAGATCCCTTGCAGCAAACCGTATTCAGGTTGCATGGAGATACAGAAAGAAGCGTCTAAGTCGTGCTTCCACCTCTCAATCAGATCAAACATTTTGA 2304 0.4036 MADFEKDEVPMLSETRAQLSDDVVDSNFRRLVSRTRSASMSIPMASLESYEKETSLVGHTGPLRSVSKTPFVHMSGPLYATHGTSNLSGQNSAAIGNRVVESKTEKFSSFNGANENRWDNDYDRKNEHLMRSGQLGMCNDPYCTTCPTYFKAAQPRTRKTSAIFDPKFQHNFYGDAKGFGRKFFSFCYAYVPGVMNPHAKDVQRWNKILAIFCLVAIFVDPLFFFLIYVKKDDKCIAIDWTMTTTLVFFRSINDFIYFCNILLQFRLAYVSRESMVVGAGDLIDHPKKIALNYLKSYLFIDLFVVFPLPQIMILSVLPKYLGSSGANYAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSFWYLFGLQRVNQCLRNACHDSKMGGCSTFIDCGRDSGHKSVTWSQNVNATACLNSTSGVFQYGVYVNAVPLTIETRVVKKYVYALFWGFQQISTLAGNQTPSYFEWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEVLRRKVREAERYNWAATRGVNEEMLLENLPEDLQTDIRRHLFDFVKKVRIFALMDETILDAICERLKQKTYIKGSKVLSQGCLVEKMVFVVRGKLESFGDDGTIVPLSEGDACGEELLTWYLEHSSVTTDGKKVRVQGQRLLSNRTVRCLTNVEAFSLRAADLEELTILFTRFLRNPHVLGALRYVSPYWRSLAANRIQVAWRYRKKRLSRASTSQSDQTF* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1523 767 Gene3D - 198 521 - -
Pvu4g1523 767 CDD CAP_ED 596 712 IPR000595 -
Pvu4g1523 767 ProSiteProfiles cAMP/cGMP binding motif profile. 596 664 IPR000595 -
Pvu4g1523 767 SUPERFAMILY Voltage-gated potassium channels 202 524 - -
Pvu4g1523 767 SMART cnmp_10 596 731 IPR000595 -
Pvu4g1523 767 Gene3D Helix hairpin bin 523 588 - -
Pvu4g1523 767 SUPERFAMILY cAMP-binding domain-like 524 718 IPR018490 -
Pvu4g1523 767 Gene3D Jelly Rolls 594 718 IPR014710 -
Pvu4g1523 767 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 761 - -
Pvu4g1523 767 Pfam Ion transport protein 207 524 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu4g1523 767 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1523 Pvu-Chr4 42375048 42385334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1523 5 673 Ion Channels AT3G17700 61.504 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1523 K05391 - gmx:100785556 1329.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1523 4 42375048 42385334 Pvu4g1523 4 42375048 42385334 ECH