Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1522 ATGGCTAATTTTGAAAAAGATGGGGAGCATAGGCCATCCGAAACACATGCACAACAGAATGAACATTTTAGGTTTGGGAAGGTTGTATCAAGGACAAGAAGTGCTTCAATTTCTGTTCCTGTGGTCTCCATGGAGCCATATGACAGAGAAACTAGTCTTGTGGGACATTCTGGTCCACTTCCTAGTGTAAGAAAACCCTCCTTAATGCATATGAGTGGGCCACTATATGCTACCAATGGAACTGAAAATCCTTTGCATCACACTAAAGTTGTGAAAGGAAACAAAGTAGTGGATAGCAAGACAGAAAAAATTTGTATTCTTAGCCTGAAAGATGAAAATCATTGCAGTAACAACTATGATAGAAAGAATGAACACTTGGTGAGGTCCAGGCTACTGGGAACATGTAATGATCCTTGTTGTACTACTTGCCCTACTTACTTCAAGGCCTCTATGCAAAGACTTCCAAAATCTTCCACTGTGTTTGATTCCCAGTTTCACTTCCACAGTGCTCTTTATGGGGATGCCAAGGGTTTTGGGAGAAAATTTCTCTCTTTCTGCACTTCATGTGTTCCTGGAGTTATGAATCCTCACTCAAAAGTTGTACAACATTGGAACAAGCTTTTGGCCATTTTTTGCATGGGAGCAATTTTCGTGGATCCATTATTTTTGTTTCTAATCTATGTACAGAAGGATGACAAATGTATAGCTATCGACTGGGACACAAGAAAAATACTTGTTTTTCTTAGAACATTGAATGATACTGTGTATTTCTTGAACATTCTTCTCCAGTTTAGGCTGGCCTATGTTTCTCCAGAGTCAAGGGTGGTTGGTGCTGGAGATTTAGTTGATCATCCCAAGAAAATTGCACTTCATTATCTGAAGGGTTATTTTCTTTTTGACCTGTTTGTTGTATTTCCTCTTCCTCAGATAATGATATTTTTTGTCCTACCAAGCCGCTTGGGGGCATCTGGAGCAAACTATGCAAAGAATCTTCTGCGTGCAGCTATCCTTGTGCAGTATATTCCCAAATTATTCAGGATCCTGCCTCTGCTAATAGGACAATCTCCAACAGGATTTATATTTGAGTCAGCTTGGGCAAATTTCATCATAAATCTTCTCATTTTCATGCTTGCTAGCCATATTGTTGGCTCTTGCTGGTATCTCTTTGGTCTACAGAGGGTTAATCAATGCTTGCGAGATGCTTGTGGAAAGACTCATATTGATAGATGCATGACAATCATTGATTGTGGAAGACAAGGTTATATCAGAAGCAAGTATTTTGACCAAGCATCAGCTCTATGGAACAACAACACAGATGCCATTGCTTGTTTGAATCCCTCACCCGGTGGTTTCCAATATGGGATCTATGTCAATACTGTACCTCTTACCATGGATATCAGTGTGCCTAACAAATATATTTATTCTCTATTCTGGGGGTTCCAGCAAATTAGTACTCTCGCTGGCAGTTTAACCCCAAGCACGTTTTGGGGAGAAGTCCTTTTTACAATGGCCATTATAGGATTGGGACTCTTGCTTTTTGCAGTTCTCATTGGAAACATACATAACTTTCTTCAAGGTCTTGGAAGAAGAAGGCTAGAAATGCAACTCAGAGGCCGCGATGTTGAGCAATGGATGAGGCATCGTCGTTTACCAGAAGATCTAAGAAAGAAAATACGAAGGTCTGAACAGTATAATTGGGCTGCAACAAAAGGGGTGAATGAAGAAATAATTCTAGAGAATTTGCCAGAAGATCTTCAGAGAGACATAAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATATTCACCCTTATGGATGAGCCTGTCTTGGATGCCGTTTGTGAGAGACTGAGACAGAAGACATACATAAAAGGAAGTATAATTTTGAACCAAGGTTGTATAGTTGAGAAGATGGTCTTTATTGTGCGTGGAAAATTGGAGAGCATTGGAGGAGATGGAGTTGGAGTTCCCTTGTCTGAAGGAGATGTTTGTGGTGAAGAACTTCTGACATGGTATCTTGAAAATTCTTCTTCTGTAAGCACAGATGGTAAAAAAGTAAGGCTTCCAGGGCAGAGGTGGCTTAGCAACAGGACAGTGAAGTGCCTAACAAATGTGGAGGCATTTTCAATCCGAGCTGAAGATCTTGAAGAAGTCACAAGCCGGTTCATGAGATTCTTGCGGAATCTTCGTGTTCAAGGATCTCTAAGGTATGAATCACCTTACTGGCGATCCTTGGCAGCAATTCGAATTCAGGTTGCATGGAGATACAGGAAGAAACGTAGAAGTCATTCTATCACCTCACAATTAGATCAATCAATGAACTTGTAG 2331 0.4037 MANFEKDGEHRPSETHAQQNEHFRFGKVVSRTRSASISVPVVSMEPYDRETSLVGHSGPLPSVRKPSLMHMSGPLYATNGTENPLHHTKVVKGNKVVDSKTEKICILSLKDENHCSNNYDRKNEHLVRSRLLGTCNDPCCTTCPTYFKASMQRLPKSSTVFDSQFHFHSALYGDAKGFGRKFLSFCTSCVPGVMNPHSKVVQHWNKLLAIFCMGAIFVDPLFLFLIYVQKDDKCIAIDWDTRKILVFLRTLNDTVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIALHYLKGYFLFDLFVVFPLPQIMIFFVLPSRLGASGANYAKNLLRAAILVQYIPKLFRILPLLIGQSPTGFIFESAWANFIINLLIFMLASHIVGSCWYLFGLQRVNQCLRDACGKTHIDRCMTIIDCGRQGYIRSKYFDQASALWNNNTDAIACLNPSPGGFQYGIYVNTVPLTMDISVPNKYIYSLFWGFQQISTLAGSLTPSTFWGEVLFTMAIIGLGLLLFAVLIGNIHNFLQGLGRRRLEMQLRGRDVEQWMRHRRLPEDLRKKIRRSEQYNWAATKGVNEEIILENLPEDLQRDIRRHLFKFVKKVRIFTLMDEPVLDAVCERLRQKTYIKGSIILNQGCIVEKMVFIVRGKLESIGGDGVGVPLSEGDVCGEELLTWYLENSSSVSTDGKKVRLPGQRWLSNRTVKCLTNVEAFSIRAEDLEEVTSRFMRFLRNLRVQGSLRYESPYWRSLAAIRIQVAWRYRKKRRSHSITSQLDQSMNL* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1522 776 ProSiteProfiles cAMP/cGMP binding motif profile. 602 680 IPR000595 -
Pvu4g1522 776 Gene3D Jelly Rolls 600 725 IPR014710 -
Pvu4g1522 776 Pfam Ion transport protein 206 527 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pvu4g1522 776 SUPERFAMILY cAMP-binding domain-like 530 730 IPR018490 -
Pvu4g1522 776 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 763 - -
Pvu4g1522 776 CDD CAP_ED 602 730 IPR000595 -
Pvu4g1522 776 MobiDBLite consensus disorder prediction 1 21 - -
Pvu4g1522 776 Gene3D - 196 526 - -
Pvu4g1522 776 MobiDBLite consensus disorder prediction 1 27 - -
Pvu4g1522 776 SUPERFAMILY Voltage-gated potassium channels 196 530 - -
Pvu4g1522 776 Gene3D Helix hairpin bin 529 593 - -
Pvu4g1522 776 SMART cnmp_10 602 735 IPR000595 -
Pvu4g1522 776 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 4 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1522 Pvu-Chr4 42362607 42371317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1522 29 678 Ion Channels AT3G17700 59.418 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1522 K05391 - gmx:112997782 1300.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1522 4 42362607 42371317 Pvu4g1522 4 42362607 42371317 ECH