Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1514 ATGGGAAAAAAGAAAAGATCTGAAGGACCTGGTGGGGGAGAAAGCTCCGAGACTCAACGCCCTGCTGAAAGAAGTGCACCGCCCCAACAACAGGCTGCTGCCCCTGGAGGGACTGGACCTCAAGGAGGAGGTAGAGGCTGGGGTCCCCAAGGAGGCCGTGGAGGTTATGGTGGGGGCCGTAGCCGTGGGATGCCTCAACAGCAATATGCCATCCCCCAACAGCAATATGGCGCTCCTCCTGATTATCAAGGTAGGGGACGGGGAGGGTCTTCTCAGCAAGGAGGTCGTGGAGGATATGGTGGTGGCCGTGGTGGTGGTGGTGGCGTTGGCGGTGGCGGTGGCCGAGGCCTAGGTTCTTCTTATGGTGGTCATTCTAGGCCACCAGTACCCGAGCTGCACCAAGCAACCTCAGTTCAATCATATCCAACTGGGGTCAGTCCTCAGCCTATATTACCAGAGGCCAGTTCCTCCCTGCCACCTGAACCGGTGGATTTGGAGCAATCAATGGGGCAAATGGTGATTCATTCTGAAGCTGCTCCTACCCCTCCTCCACAAAGCAAATCTTCTATGAGGTTTCCCCTTCGACCTGGGAAGGGTAGCTATGGCATAAAATGCATTGTTAAGGCTAATCATTTCTTTGCCGAGTTACCAAACAAAGATCTTCATCAATATGATGTTACAATCACCCCTGAAGTGACATCCAGAGGTGTGAACCGTGCTGTTATGGAGCAATTGGTTAGGCTGTATCGGGAATCTCACTTGGGCAAGAGGCTTCCTGCATATGATGGACGCAAGAGCCTCTATACTGCTGGGCCATTGCCATTTATTTCAAAGGAGTTCAGAATTACTCTTATTGATGATGATGAAGGAGCAGCAGGAGGACAGAGGAGGGACCGAGAGTTCAAGGTGGTGATAAAGTTGGCTGCACGGGCAGACCTTCACCATTTAGGGCTCTTTTTGCAGGGAAAACAAACTGATGCTCCCCAAGAGGCTTTGCAGGTTCTTGACATTGTACTCCGTGAACTCCCTACTACAAGGTATTGTCCTGTAGGAAGATCATTTTATTCACCTGATCTGGGGAGAAGACAGCCTTTAGGTGAGGGATTGGAGAGCTGGCGAGGTTTCTACCAGAGTATCCGTCCAACTCAGATGGGTTTGTCGCTGAATATTGATATGTCCTCCACTGCATTTATTGAGCCACTGCCAGTTATTGACTTTGTGACCCAACTGCTGAATAGAGATGTTTCTGCTCGACCACTGTCTGATGCTGATCGAGTGAAGATCAAGAAAGCTCTTCGAGGAATCAAAGTCGAGGTAACACACCGTGGAAATATGAGAAGAAAATACCGAATCTCTGGCTTGACTTCTCAGGCTACCAGAGAGCTGACGTTCCCTGTAGATGAAAGGGGAACTATGAAATCTGTTGTGGAGTACTTTTATGAGACATATGGGTTTGTCATTCAACATACTCAGTGGCCTTGTCTGCAAGTTGGTAATACACAGAGGCCAAACTATTTGCCAATGGAGGTATGCAAGATTGTGGAAGGTCAAAGATATTCAAAGAGGTTGAATGAGAGGCAGATCACTGCTCTTCTGAAAGTTACATGCCAGCGTCCTGTTGAGAGGGAGCGTGATATCATGCAGACTGTATATCACAATGCATACCATGAAGATCCTTATGCCAAAGAGTTCGGAATCAAAATTAGTGAAAAGCTTGCTCAAGTTGAAGCACGCATCCTACCTGCCCCATGGCTCAAGTATCATGACACTGGTAGAGAGAAGGATTGTCTTCCTCAAGTTGGGCAATGGAATATGATGAACAAGAAAATGGTGAATGGGGGCACTGTTAACAACTGGTTCTGCATTAATTTTTCAAGGAGTGTTCAAGATAGTGTTGCCCGAGGCTTTTGCTATGAACTTGCTCAGATGTGCTATATATCTGGCATGGCATTTAATCCTGAGCCAGTTGTCCCACCAGTTAGTGCTCGCCCTGATCAAGTGGAGAAAGTTCTGAAAACCCGTTATCATGATGCAAAGAATAAGCTTCAGGGAAGGGAGCTTGATTTGCTCATTGTTATTTTGCCTGACAATAATGGATCTCTTTATGGTGATCTCAAACGTATATGTGAGACAGATCTTGGACTAGTTTCACAATGTTGTTTGACCAAGCATGTGTTTAAAATGAGCAAGCAGTACCTTGCCAATGTTGCGTTGAAAATTAATGTAAAAGTGGGTGGGAGAAATACTGTACTTGTTGATGCACTTTCACGCCGCATCCCCTTAGTTGGTGATAGACCCACTATTATTTTTGGAGCTGATGTGACTCATCCACATCCAGGAGAGGATTCAAGCCCGTCAATTGCAGCAGTTGTGGCTTCTCAAGATTATCCTGAAATTACGAAGTATGCTGGTTTAGTCTGTGCCCAAGCTCATAGACAGGAACTCATTCAGGATCTTTTCAAGCAATGGCAAGATCCAGTCAGAGGAACAGTGACTGGTGGAATGATCAAAGAACTTCTTATATCTTTTAGGAGGGCTACGGGACAGAAGCCACAGCGCATTATATTTTACAGGGATGGTGTAAGTGAAGGCCAATTTTACCAAGTTCTACTGTTTGAGCTTGATGCTATTCGAAAGGCATGTGCATCCCTTGAACCCAACTATCAACCTCCTGTGACGTTTGTTGTGGTTCAAAAGCGTCATCACACAAGGCTCTTTGCTAGCAACCATCATGACAAGAGTTCTGTTGACAGGAGTGGCAACATATTGCCTGGCACAGTTGTTGATTCTAAAATCTGCCATCCAACAGAGTTTGACTTTTATCTTTGTAGCCATGCTGGAATACAGGGTACAAGCCGTCCTGCTCACTATCACGTGTTGTGGGATGAAAACAATTTTACTGCGGATGCTTTGCAAACTCTTACTAACAACCTTTGCTACACATATGCTAGATGCACACGATCTGTTTCAATTGTCCCTCCTGCATATTATGCCCATTTGGCTGCTTTCCGAGCAAGATTTTACATGGAACCAGAGACGTCCGATAGTGGGTCGATGACGAGTGGTGCAGTTGCTGGCCGTGGAATGGGTGGCGGTATGGGTCGAAGTACCAGAGCTCCTGGAGCTAATGCTGCTGTGCGACCACTACCTGCTTTGAAGGAAAATGTGAAGAGGGTTATGTTTTATTGTTAA 3192 0.4662 MGKKKRSEGPGGGESSETQRPAERSAPPQQQAAAPGGTGPQGGGRGWGPQGGRGGYGGGRSRGMPQQQYAIPQQQYGAPPDYQGRGRGGSSQQGGRGGYGGGRGGGGGVGGGGGRGLGSSYGGHSRPPVPELHQATSVQSYPTGVSPQPILPEASSSLPPEPVDLEQSMGQMVIHSEAAPTPPPQSKSSMRFPLRPGKGSYGIKCIVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEQLVRLYRESHLGKRLPAYDGRKSLYTAGPLPFISKEFRITLIDDDEGAAGGQRRDREFKVVIKLAARADLHHLGLFLQGKQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSARPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVYHNAYHEDPYAKEFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWFCINFSRSVQDSVARGFCYELAQMCYISGMAFNPEPVVPPVSARPDQVEKVLKTRYHDAKNKLQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVGDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDYPEITKYAGLVCAQAHRQELIQDLFKQWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAVAGRGMGGGMGRSTRAPGANAAVRPLPALKENVKRVMFYC* 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1514 1063 Pfam PAZ domain 405 530 IPR003100 GO:0005515
Pvu4g1514 1063 Pfam N-terminal domain of argonaute 205 339 IPR032474 -
Pvu4g1514 1063 ProSiteProfiles Piwi domain profile. 689 1010 IPR003165 GO:0003676
Pvu4g1514 1063 Pfam Argonaute linker 2 domain 541 587 IPR032472 -
Pvu4g1514 1063 SMART PAZ_2_a_3 405 537 IPR003100 GO:0005515
Pvu4g1514 1063 MobiDBLite consensus disorder prediction 12 36 - -
Pvu4g1514 1063 SMART DUF1785_2 348 400 IPR014811 -
Pvu4g1514 1063 Gene3D - 758 1063 IPR036397 GO:0003676
Pvu4g1514 1063 Pfam Mid domain of argonaute 598 673 IPR032473 -
Pvu4g1514 1063 Gene3D paz domain 394 519 - -
Pvu4g1514 1063 SMART Piwi_a_2 689 1010 IPR003165 GO:0003676
Pvu4g1514 1063 MobiDBLite consensus disorder prediction 1 164 - -
Pvu4g1514 1063 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 93 1062 - -
Pvu4g1514 1063 Gene3D - 579 752 - -
Pvu4g1514 1063 CDD Piwi_ago-like 559 1009 IPR045246 -
Pvu4g1514 1063 PANTHER PROTEIN ARGONAUTE 1A 93 1062 - -
Pvu4g1514 1063 MobiDBLite consensus disorder prediction 132 152 - -
Pvu4g1514 1063 ProSiteProfiles PAZ domain profile. 401 515 IPR003100 GO:0005515
Pvu4g1514 1063 CDD PAZ_argonaute_like 400 514 - -
Pvu4g1514 1063 Pfam Argonaute linker 1 domain 349 399 IPR014811 -
Pvu4g1514 1063 SUPERFAMILY PAZ domain 206 552 IPR036085 GO:0005515
Pvu4g1514 1063 Pfam Glycine-rich region of argonaut 77 181 IPR024357 -
Pvu4g1514 1063 Pfam Piwi domain 690 1009 IPR003165 GO:0003676
Pvu4g1514 1063 SUPERFAMILY Ribonuclease H-like 675 1010 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1514 Pvu-Chr4 42218739 42225570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1514 81 1063 Eukaryotic Initiation Factors Gene Family AT1G48410 81.552 0.0 1624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1514 K11593 - gmx:100778754 1860.88