Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1490 ATGGCAACTCCAAGTTCCCATGGATTCACCTATGATGTGTTCCTCAGCTTTAGAGGAGAAGACACGCGTTATGATTTCACTGCCAATCTCTTCAAAGCTCTTTCTGACAAGGGAATTCACACTTTCTTTGATGATGACAAACTTGAAAGTGGAGAAGAAATAACAGCAACACTTCTCAAGACAATTGAAGAGTCTAGGATTGCCATAGTTGTGCTCTCTCACAACTATGCTTCTTCCTCCTTTTGCTTGGATGAACTCGCTACCATCCTTCACTGCAAGACTAAAGGGATGTTGGTTATACCCGTGTTTTATAAGGTGGATCCTTCTCATGTAAGACATCAGAAAGGTAGCTATGAAGAAGCACTGGCTAAGCATCAAAAGAGGTTCAAAGATAAGAAGGAGAAGCTGCAGAAATGGAAGGTGGCTCTGCGTCAAGTTGCTGACTTATCTGGCTATCATTTTAAAGATGGAGATGAATACCAATACGACTTTATTGGTAGAATTGTTGAACGGGTTTCTAGGGAGATTAATCGTGCTCCTTTACATGTTGCGGATCACCCAGTTGGTCTACTGTCACAAGTGCTGAAAGTGAAGAAACTTTTGGATGTTGGATCTAATGATGTTGTCCACATGATAGGGATCCATGGAATGGGAGGGATAGGAAAAACAACACTTGCTCTAGCAGCGTATAATTTAATTGCTGGTGATTTTGATGGCTCATGTTTTCTTCAAAATGTTAGAGAAGAATCAAACAAATATGGGTTAAAACACCTCCAAACCCTCATTCTTTCTGAAATACTTGGAGAGAAGAACATCAACTTAGCAAGTGTGCAACGAGGAATTTCAGTGATACAAGAAAGGCTCCGTAGGAAGAAAGTTCTCTTGATTCTAGATGATGTTGACAACCGAAAGCAGTTACAAGCATTTGCTGGAAGATCCGATTGGTTTGGTCCCGGCAGCAGAGTTATCATTACCACTCGGGACGAACAACTGCTAAAATCTCATGAGGTTGAAAGAACTTATGAGGTGGGGGAATTGAACAAGAATGATTCTCTTCAATTGCTTATATGGAATGCTTTCAAAAGGGAAAATTTTGATCCAAGTTACAAGGATGTCTTGAAACGTGTAGTAACTTATGCTTCTGGTCTCCCATTGGCTTTAGAAGTAATAGGTTCCAACTTGGTTGGAAAAAGTGTGGAGGAATGGGAGTCTGCTATTGAACATTACAAAAGAATTCCTAATCGTGAAATCCTAGGGATACTTAAAGTAAGCTTTGATGCTTTGGGAGAAGAAGAAAAAAGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGAAGTAATTTGACAGAAGTTGAACATATACTTGGTGCTCTTTATGATAACAACATGAAACATCATGTTGGGGTGTTGGTAGAAAAATCTCTCATAAAGGTTTGGCGTGGAAGGCGTAGTGTTGTTGAAATGCACGACTTGATTGAGGACATGGGTAGGCAAATTGACCAGCAAGAGTCACCCAAAGAGCCAGGGAAACGCAGGAGATTATGGTTACCTAAAGATATCATTCATGTTTTAAAACACAACACAGGAACTAGCAAAATTGAAATCATTTGTCTGGATTTGTCTATAAGTGAGAAAGAAGAAACACTAGAATGGAATGCAAACGCGTTCAAAAGGATGAACAACCTTAAAATACTTATTATTAGAAATGTTAAATTTTCTAAAGTTCCCAATTATTTTCCGGAAAGTTTGAGTGTACTGGAATGGCATGGATACCCTTCAAATTGTTTTCCATCAAATTTTCTTCCAAATAAACTCGTCATCTGCAACTTAACTGACAGCATCTTTATGTCATTTGGATTCCATGGCTCGTTGAAGAAGTTCGAGAATCTAACTGTCTTGAATTTTGACCAGTGCAAATTTTTAACACAGATACCTGATATGTCTGATCTCCCAAATTTGGAGGAAGTTTCATTCAAAGAGTGTGACAGTTTAGTTGCGGTTCACGACTCTATTGGTTTTATGACTAAACTGAAAATATTGAATGCGGAAGGTTGCAACAAGCTTATGAGTTTTCCACCTTTGAACTTGCCCACTCTTGAAAGTCTAGAACTTTCATATTGTTCGAATCTAGAGAAATTTCCAGAAATACTAGGAAAGATGGGAAACATAAGGGTACTTCGATTGGAGGAGCTTCCCATAAAAGAATTGCCAGTTTCGTTTCAAAACCTTATTCGACTCGAAGACTTAATCTTGTCATGTGAAATTGTTCACTTACCAAGTAGCATTGTCATGATGCCTGAGTTGTTGGATATTAGTGTTACTAATTGCAAGGGGTGGCAATGGGTAAAATCAAAAGATGGTGAAGATAACATAGGCTCAATGGTTTCTTCAAAGGTAGATTGGTTTTTGGCCTCGTCTTGCAACCTTGATGATCACTTCTTCTCAACAGGTTTCATGCAGTTGGCACAAGTGCGTAGTTTATTTCTAAGGGAAAATAACTTCAAATTCCTTCCTGAATGCATCAAAGAATTTCACAACCTCTACACTATTGATGTGAGTCATTGCAAGCATCTTCAGGAAATTAGAGGGGTTCCACCAAAATTAAAGCGTTTCAAGGCAATAAACTGTATATCCTTGAGTTCCTCGAGCTCAAGCATGTTGCTGAATAAGCAAATGCACGAGGCTCGAAAAACTGAATTCTGGTTTTCAGGAACAAGTATTCCAGACTGGTTTGATCACCAAAGCAGTGGATCTTCAAGTTCTTTCTGGTTTCGTAATAAGTTTCCTGCCAAAGTTCTTTCTCTTCTTATTGCACCTGTAGGTGATAAAGATGAGTTTCATTTCATTAGACCTATGGTGTTCATTGATGGCAAAGTTCAAGAATCAAAATTCTTTTGTTTCAAGGAAATAGAGAGGATGTTTGAATTGGATCAAACATACCTCTTTGATCTACAAGTGCTACCTGTGTATGGTAATTTGTGTGAACTACCTTTAGGAAAGGAATGGAAGCATGTGGAGGTTACATATGAAGGTGTGATAAAGACCTCAATTGTTAAAGCAACAGGAATCCATGTATTCAAAGAGGAAAACAGCATCATGGAGGACATTCGGTTTGATGATCCTTATAGCAACAAGAAAGTAGACAAAGATCTAAATGCTTCTCAATCACAAAACTACTCCTTGTTACAAAGCATAGGTTTGTTCCCCACATGCAAATTTTTCCTAGGTTTTTTTCTTTTTGTTTTCTTGCTTTTATTTTTTATTTTATTACTAGCTTGA 3279 0.3815 MATPSSHGFTYDVFLSFRGEDTRYDFTANLFKALSDKGIHTFFDDDKLESGEEITATLLKTIEESRIAIVVLSHNYASSSFCLDELATILHCKTKGMLVIPVFYKVDPSHVRHQKGSYEEALAKHQKRFKDKKEKLQKWKVALRQVADLSGYHFKDGDEYQYDFIGRIVERVSREINRAPLHVADHPVGLLSQVLKVKKLLDVGSNDVVHMIGIHGMGGIGKTTLALAAYNLIAGDFDGSCFLQNVREESNKYGLKHLQTLILSEILGEKNINLASVQRGISVIQERLRRKKVLLILDDVDNRKQLQAFAGRSDWFGPGSRVIITTRDEQLLKSHEVERTYEVGELNKNDSLQLLIWNAFKRENFDPSYKDVLKRVVTYASGLPLALEVIGSNLVGKSVEEWESAIEHYKRIPNREILGILKVSFDALGEEEKSVFLDIACCFKGSNLTEVEHILGALYDNNMKHHVGVLVEKSLIKVWRGRRSVVEMHDLIEDMGRQIDQQESPKEPGKRRRLWLPKDIIHVLKHNTGTSKIEIICLDLSISEKEETLEWNANAFKRMNNLKILIIRNVKFSKVPNYFPESLSVLEWHGYPSNCFPSNFLPNKLVICNLTDSIFMSFGFHGSLKKFENLTVLNFDQCKFLTQIPDMSDLPNLEEVSFKECDSLVAVHDSIGFMTKLKILNAEGCNKLMSFPPLNLPTLESLELSYCSNLEKFPEILGKMGNIRVLRLEELPIKELPVSFQNLIRLEDLILSCEIVHLPSSIVMMPELLDISVTNCKGWQWVKSKDGEDNIGSMVSSKVDWFLASSCNLDDHFFSTGFMQLAQVRSLFLRENNFKFLPECIKEFHNLYTIDVSHCKHLQEIRGVPPKLKRFKAINCISLSSSSSSMLLNKQMHEARKTEFWFSGTSIPDWFDHQSSGSSSSFWFRNKFPAKVLSLLIAPVGDKDEFHFIRPMVFIDGKVQESKFFCFKEIERMFELDQTYLFDLQVLPVYGNLCELPLGKEWKHVEVTYEGVIKTSIVKATGIHVFKEENSIMEDIRFDDPYSNKKVDKDLNASQSQNYSLLQSIGLFPTCKFFLGFFLFVFLLLFFILLLA* 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1490 1092 ProSiteProfiles TIR domain profile. 9 176 IPR000157 GO:0007165
Pvu4g1490 1092 PRINTS Disease resistance protein signature 211 226 - -
Pvu4g1490 1092 PRINTS Disease resistance protein signature 287 301 - -
Pvu4g1490 1092 PRINTS Disease resistance protein signature 380 394 - -
Pvu4g1490 1092 PRINTS Disease resistance protein signature 694 710 - -
Pvu4g1490 1092 SUPERFAMILY "Winged helix" DNA-binding domain 416 525 IPR036390 -
Pvu4g1490 1092 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 439 IPR027417 -
Pvu4g1490 1092 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 152 IPR035897 -
Pvu4g1490 1092 SMART till_3 10 149 IPR000157 GO:0007165
Pvu4g1490 1092 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 914 IPR044974 GO:0006952
Pvu4g1490 1092 SUPERFAMILY L domain-like 548 887 - -
Pvu4g1490 1092 Gene3D - 178 340 IPR027417 -
Pvu4g1490 1092 Gene3D Ribonuclease Inhibitor 531 717 IPR032675 -
Pvu4g1490 1092 Coils Coil 115 142 - -
Pvu4g1490 1092 Gene3D - 345 429 IPR042197 -
Pvu4g1490 1092 Gene3D Ribonuclease Inhibitor 718 911 IPR032675 -
Pvu4g1490 1092 Pfam TIR domain 11 176 IPR000157 GO:0007165
Pvu4g1490 1092 Gene3D - 9 177 IPR035897 -
Pvu4g1490 1092 Pfam NB-ARC domain 196 410 IPR002182 GO:0043531
Pvu4g1490 1092 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 14 914 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1490 Pvu-Chr4 41950565 41954663 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1490 11 776 WRKY Transcription Factor Family AT4G12020 31.021 9.88e-81 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1490 - - var:108344036 1702.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g1490 4 41950565 41954663 Pvu2g3432 2 49011859 49016470 PCT