Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g1481 ATGGCAACTCCAAGTTCCCATGGATTCACCTATGATGTGTTCCTCAGCTTTAGAGGGAAAGACACGCGTTATGCTTTCACTGCCAATCTCTTCAAAGCTCTTGATGACAAGGGAATTCACAGTTTCTTTGATGATGACAAACTTGAAAGCGGAGAAGAAATAACAGCAACACTTGTGAAGGCAATTGAAGAGTCTAGGATTGCCATAGTTGTCCTCTCTCCCAACTATGCTTCTTCCTCCTTTTGCTTGGATGAAATCGCTACCATCCTTCACTGCAAGACTAAAGGCCTCTTGGTTATACCCGTCTTTTATAACGTGGATCCTTCTCATGTAAGACACCAGAAAGGTAGCTATGAAGAAGCACTGGCTAAGCATCAAAAGAGGTTCAAAGCTAAGAAGGAGAAGCTGCAGAAATGGAAGCTGGCTCTGCGTCAAGTTGCTGACTTATCTGGCTATCACTTCCTAGACGGTGATGGATACGAATACAAGTTTATTGGGAATATTGTGGACTCGGTGTGCGACAAGATTAATCCTCGTCGTTTACATGTTGCGGATTACCCAGTTGGACTAGGGCCGCAAGTGCTACAACTAAGGAAGCTTCTGAATGTTGAATCTGGTGATGGATTCCACATGATAGCTATCCATGGAATGGGAGGGATCGGAAAAACAACACTCGCTCTAGCAGTTTATAATTTCATTGCTGTGTGTTTTGATGGTTCTTGTTTTCTTCAAAACGTGAGAGAGAAATCAAACAAACATGGGCTAGAACACCTCCAAAGCATCCTTCTTTCAAAAATACTTGGAGAGAAGGACATCAACTTAGCAAGTGAGCATGAAGGAATTTCAGTGATACAACAAAGGCTCCGTAAGAAGAAAGTTCTCTTCATTCTAGATGATGTTGACAACCGAAAGCAGTTACAAGCATTTGCTGGAAGATCCGATTGGTTTGGTCCCGGCAGCAGAGTTATCATTACCACTCGGGACAAACAACTGCTAAAATCTCATGAGGTTGAACGAACTTATGAGGTGGAGGAATTGGACGAGGATGATTCTCTTCAATTGCTTATATGGAATGCATTCAAAAGTGAAAATTTTGATCCAAGTTACGAGGACGTCTTGGAACGTGTAGCAACTTATGCTTCTGGTCTACCGTTGGCTTTAGAAGTAATAGGTTCCAACTTGGTTGGAAAAAGTGTGGAGGAATGGGAGTCTGCTATTGAACATTACAAAAGAATTCCTAATGGTGAAATCCTAGAGATACTTAAAGTAAGCTTTGATGCTTTGGGGGAAGAAGAAAAAAGTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGAAGTAATCAGCCAGAAGTTGAACATATACTTGGTGCTCTTTATGATAACAACATGAAACATCATATTGGGGTGTTAGTAGAAAAATCTCTCATAAAGGTTAATGTTTGGCGTAGAGTAGTTGAAATGCATGACTTGATTGAGGACATGGGTAGGCAAATTGACCGGCAAGAGTCAACCAAAGAGCTAGGGGAACGCAGGAGATTATGGTTACCTAAAGATATCATTCATGTTTTAAAACACAACACAGGAACTAGCAAAATTGAAATCATATGTTTGGATTTGTCTATAAGTGAGAAAGAAGAAACAATAGAATGGAATGCAAATGCCTTCGAAAGGATGAAAAACCTTAAAATACTTATTATTAGAAATGGCAAATTTTCGAAAGGTCCCAACTATTTTCTGGAAAGTTTGAGTGTACTGGAATGGCATGGATACCCTGCAAATTGTTTACCATCAAATTTTCTTCCAAATAAACTCAACATCTGCAAGTTAACTAACAGCAACTTGACGTCATTTGAATTTCACAACCTCTTCAGTCTTGATAAGTTCGAGAATCTAATTGTCTTGAATTTTGACCAGTGCAAATTTTTAACACAGATACCTGATATGTCTGATCTCCAAAATTTGGAGGAAGTTTCATTCAAAGAGTGTGACAGCTTAGTTGCAGTTCACGACTCAATTGGTTTTATGACTAAACTGAAAATATTGAATGCGAAAGGTTGCAGCAAGCTTATAAGTTTTCCGCCTCTGAACTTGCCCAGTCTTGAAAGTCTAGAACTTTCATATTGTTTGAATCTAGAGAAATTTCCAGAAATACTAGGAAAGATGGGAAATATAAGGGTACTTCGAGTGGCGGAGCTTCCCATAAAAGAATTGCCATCTTCGTTTCAAAACCTTATTCGACTAGAATACTTAACCTTGTCATGTCAAATGGTTGACTTACCAAGTAGCATTGTCATAATGCCTGAGTTGTTGGGTATTATTTTTATTAATTGCAAGGAGTGGCAATGGTTAAAAACAGAAGAGGGTGAAGATAACATAGGCTCAATGGTTTCTTCAAACGTAAATTGGTTTGTGGCCTCGTCTTGCAACCTGGATGATCACTTCTTTTCAGCAGGTTTCATGCAGTTGGCACAAGTGCGTAGTTTATTGCTAAGGAAAAATAATTTTAAATTCCTTCATGAATGCATCAAAGAATTTCACAACCTCCACACTCTTGATGTGAGTCATTGCAAGCGTCTTCAAGAAATTAGAGGGATTCCACCAAAATTAAAGCGTTTCAAGACAATAAACTGTATATCCTTGAGTTCCTCGAGCATGTTTCTGAATAAGCAATTGCACGAGGCTGGAAAAACTGAATTCTGGTTTCCAGGAACAAGTATTCCAGAGTGGTTTGATCACCAAAGCAGTGGACCTTCATGTTCTTTCTGGTTTCGTAATAAGTTTCCTTCCAAAGTTCTTTCTCTTCTTCTTGCACCTGTGTGTGATATGCATGACTATGATTTCATTAGACCTATGGTGTTCATTGATGGCAAAGTTCAAGAATCAAAAACATTTTGTTTCAACGAAACAGGGAGGATGATTGAATTGGATCAAACATTCCTCGTTGATGTACAAAAGCTAATTGTCTATAGTAATTTGGTTGAAGTACCTTTAGAAAAGGAATGGAAGCATGTGGAGGTTACATATGAAGGTGTGATACAGACCTCACTTGTTAAAGCAACAGGAATCCATGTATTCAAAGAGGAAAATAACAACATGGAGGACATTCAGTTTGATGATCCTTATAGCAACAAGAAAGTAGACAAAGATATAAATGCTTCTCAATCTCAAAACCACTCCTTGTTACAAAGCATAGCACCAACTCACCTAGGGTATGAGTGGGATATTTCCATATATTAA 3237 0.3874 MATPSSHGFTYDVFLSFRGKDTRYAFTANLFKALDDKGIHSFFDDDKLESGEEITATLVKAIEESRIAIVVLSPNYASSSFCLDEIATILHCKTKGLLVIPVFYNVDPSHVRHQKGSYEEALAKHQKRFKAKKEKLQKWKLALRQVADLSGYHFLDGDGYEYKFIGNIVDSVCDKINPRRLHVADYPVGLGPQVLQLRKLLNVESGDGFHMIAIHGMGGIGKTTLALAVYNFIAVCFDGSCFLQNVREKSNKHGLEHLQSILLSKILGEKDINLASEHEGISVIQQRLRKKKVLFILDDVDNRKQLQAFAGRSDWFGPGSRVIITTRDKQLLKSHEVERTYEVEELDEDDSLQLLIWNAFKSENFDPSYEDVLERVATYASGLPLALEVIGSNLVGKSVEEWESAIEHYKRIPNGEILEILKVSFDALGEEEKSVFLDIACCFKGSNQPEVEHILGALYDNNMKHHIGVLVEKSLIKVNVWRRVVEMHDLIEDMGRQIDRQESTKELGERRRLWLPKDIIHVLKHNTGTSKIEIICLDLSISEKEETIEWNANAFERMKNLKILIIRNGKFSKGPNYFLESLSVLEWHGYPANCLPSNFLPNKLNICKLTNSNLTSFEFHNLFSLDKFENLIVLNFDQCKFLTQIPDMSDLQNLEEVSFKECDSLVAVHDSIGFMTKLKILNAKGCSKLISFPPLNLPSLESLELSYCLNLEKFPEILGKMGNIRVLRVAELPIKELPSSFQNLIRLEYLTLSCQMVDLPSSIVIMPELLGIIFINCKEWQWLKTEEGEDNIGSMVSSNVNWFVASSCNLDDHFFSAGFMQLAQVRSLLLRKNNFKFLHECIKEFHNLHTLDVSHCKRLQEIRGIPPKLKRFKTINCISLSSSSMFLNKQLHEAGKTEFWFPGTSIPEWFDHQSSGPSCSFWFRNKFPSKVLSLLLAPVCDMHDYDFIRPMVFIDGKVQESKTFCFNETGRMIELDQTFLVDVQKLIVYSNLVEVPLEKEWKHVEVTYEGVIQTSLVKATGIHVFKEENNNMEDIQFDDPYSNKKVDKDINASQSQNHSLLQSIAPTHLGYEWDISIY* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g1481 1078 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 14 913 - -
Pvu4g1481 1078 SUPERFAMILY "Winged helix" DNA-binding domain 416 524 IPR036390 -
Pvu4g1481 1078 Coils Coil 122 142 - -
Pvu4g1481 1078 Gene3D - 345 429 IPR042197 -
Pvu4g1481 1078 Pfam TIR domain 11 172 IPR000157 GO:0007165
Pvu4g1481 1078 SUPERFAMILY L domain-like 549 888 - -
Pvu4g1481 1078 PRINTS Disease resistance protein signature 211 226 - -
Pvu4g1481 1078 PRINTS Disease resistance protein signature 287 301 - -
Pvu4g1481 1078 PRINTS Disease resistance protein signature 380 394 - -
Pvu4g1481 1078 PRINTS Disease resistance protein signature 695 711 - -
Pvu4g1481 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 439 IPR027417 -
Pvu4g1481 1078 Pfam NB-ARC domain 204 411 IPR002182 GO:0043531
Pvu4g1481 1078 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 152 IPR035897 -
Pvu4g1481 1078 Gene3D Ribonuclease Inhibitor 501 787 IPR032675 -
Pvu4g1481 1078 ProSiteProfiles TIR domain profile. 9 176 IPR000157 GO:0007165
Pvu4g1481 1078 Gene3D Ribonuclease Inhibitor 789 912 IPR032675 -
Pvu4g1481 1078 Gene3D - 187 340 IPR027417 -
Pvu4g1481 1078 CDD AAA 193 328 - -
Pvu4g1481 1078 Gene3D - 5 184 IPR035897 -
Pvu4g1481 1078 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 913 IPR044974 GO:0006952
Pvu4g1481 1078 SMART till_3 10 149 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g1481 Pvu-Chr4 41876323 41886815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g1481 11 777 WRKY Transcription Factor Family AT4G12020 30.615 4.92e-76 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g1481 - - var:108344036 1562.74